BLASTX nr result

ID: Coptis21_contig00027316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027316
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264396.1| PREDICTED: anaphase-promoting complex subuni...    68   7e-10
dbj|BAM64819.1| hypothetical protein [Beta vulgaris]                   64   2e-08
ref|XP_002325348.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002319120.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
emb|CBH19893.1| cell division control 20 [Solanum lycopersicum v...    60   1e-07

>ref|XP_002264396.1| PREDICTED: anaphase-promoting complex subunit cdc20 [Vitis
           vinifera] gi|147796362|emb|CAN70390.1| hypothetical
           protein VITISV_013663 [Vitis vinifera]
           gi|296088759|emb|CBI38209.3| unnamed protein product
           [Vitis vinifera]
          Length = 450

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/34 (88%), Positives = 32/34 (94%)
 Frame = -3

Query: 283 ETLRFWNVFGTPEVATKPAPKANPEPFAKVNRIR 182
           ETLRFWNVFGTPEVA KPAPKA+PEPFA +NRIR
Sbjct: 417 ETLRFWNVFGTPEVAAKPAPKAHPEPFAHLNRIR 450


>dbj|BAM64819.1| hypothetical protein [Beta vulgaris]
          Length = 610

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/34 (91%), Positives = 31/34 (91%)
 Frame = -3

Query: 283 ETLRFWNVFGTPEVATKPAPKANPEPFAKVNRIR 182
           ETLRFWNVFGTPEVA KPAPKA PEPFA VNRIR
Sbjct: 578 ETLRFWNVFGTPEVA-KPAPKAAPEPFAHVNRIR 610


>ref|XP_002325348.1| predicted protein [Populus trichocarpa] gi|222862223|gb|EEE99729.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -3

Query: 283 ETLRFWNVFGTPEVATKPAPKANPEPFAKVNRIR 182
           ETLRFWNVFG PE+A K APKANPEPF+ +NRIR
Sbjct: 422 ETLRFWNVFGVPEIAAKAAPKANPEPFSHLNRIR 455


>ref|XP_002319120.1| predicted protein [Populus trichocarpa] gi|222857496|gb|EEE95043.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -3

Query: 283 ETLRFWNVFGTPEVATKPAPKANPEPFAKVNRIR 182
           ETLRFWNVFG PEVA K APKANPEPF+ +NR+R
Sbjct: 422 ETLRFWNVFGVPEVAAKAAPKANPEPFSHLNRLR 455


>emb|CBH19893.1| cell division control 20 [Solanum lycopersicum var. cerasiforme]
          Length = 453

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = -3

Query: 283 ETLRFWNVFGTPEVATKPAPKANPEPFAKVNR 188
           ETLRFWNVFGTPE A KPAPKANPEPFA +NR
Sbjct: 420 ETLRFWNVFGTPEAA-KPAPKANPEPFAHLNR 450


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