BLASTX nr result

ID: Coptis21_contig00027301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027301
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531984.1| conserved hypothetical protein [Ricinus comm...    71   8e-11
ref|XP_002311149.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_003633459.1| PREDICTED: uncharacterized protein LOC100853...    69   4e-10
emb|CBI31718.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_003555814.1| PREDICTED: uncharacterized protein LOC100815...    67   1e-09

>ref|XP_002531984.1| conserved hypothetical protein [Ricinus communis]
           gi|223528381|gb|EEF30420.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 91

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 30/42 (71%), Positives = 35/42 (83%)
 Frame = +2

Query: 182 FWCASFLIAWAAVLQGHMMWLKRQDSFKNKFGTLEEEEDEIN 307
           FW ASFLI WAA LQGHMMWL+RQDSFK KFGTL + +++ N
Sbjct: 12  FWFASFLIGWAAALQGHMMWLQRQDSFKQKFGTLNQNDNDSN 53


>ref|XP_002311149.1| predicted protein [Populus trichocarpa] gi|222850969|gb|EEE88516.1|
           predicted protein [Populus trichocarpa]
          Length = 59

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = +2

Query: 185 WCASFLIAWAAVLQGHMMWLKRQDSFKNKFGTLEEEEDEI 304
           W ASFLIAWAA LQGHMMWL+RQDSFK KFGTL E+  ++
Sbjct: 17  WFASFLIAWAAALQGHMMWLRRQDSFKQKFGTLNEDNSDV 56


>ref|XP_003633459.1| PREDICTED: uncharacterized protein LOC100853537 [Vitis vinifera]
          Length = 106

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = +2

Query: 182 FWCASFLIAWAAVLQGHMMWLKRQDSFKNKFGTLEEEEDEIN 307
           FW ASFL+AWAA LQGHMMWL+RQD+FK KFG L ++ D  N
Sbjct: 65  FWVASFLVAWAAALQGHMMWLQRQDAFKQKFGDLGQDHDPEN 106


>emb|CBI31718.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = +2

Query: 182 FWCASFLIAWAAVLQGHMMWLKRQDSFKNKFGTLEEEEDEIN 307
           FW ASFL+AWAA LQGHMMWL+RQD+FK KFG L ++ D  N
Sbjct: 346 FWVASFLVAWAAALQGHMMWLQRQDAFKQKFGDLGQDHDPEN 387


>ref|XP_003555814.1| PREDICTED: uncharacterized protein LOC100815740 [Glycine max]
          Length = 55

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = +2

Query: 182 FWCASFLIAWAAVLQGHMMWLKRQDSFKNKFGTLEEEEDEIN 307
           FW ASFLIAWAA LQGHMMWL+RQDSFK+KFG  ++     N
Sbjct: 14  FWMASFLIAWAAALQGHMMWLQRQDSFKHKFGNPDDHPHNSN 55


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