BLASTX nr result
ID: Coptis21_contig00027294
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00027294
(1176 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003603188.1| RWP-RK domain-containing protein [Medicago t... 75 3e-25
dbj|BAK61852.1| hypothetical protein [Citrus unshiu] 114 5e-23
ref|XP_001753386.1| predicted protein [Physcomitrella patens sub... 109 1e-21
ref|XP_002516115.1| conserved hypothetical protein [Ricinus comm... 101 4e-19
ref|XP_002308532.1| predicted protein [Populus trichocarpa] gi|2... 90 5e-18
>ref|XP_003603188.1| RWP-RK domain-containing protein [Medicago truncatula]
gi|355492236|gb|AES73439.1| RWP-RK domain-containing
protein [Medicago truncatula]
Length = 498
Score = 74.7 bits (182), Expect(3) = 3e-25
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Frame = +1
Query: 661 GIVIRNGDC--QRSHPIGESSYVRLPRSRLAAQRERTGRLKMSDIVKYFDLPIQVAS--Q 828
G++ N D Q +G++ +R L+ QR+++ +LK+SD+ YF LPI A+ +
Sbjct: 360 GLIQNNSDEVEQEQEQMGDNGTLR----NLSEQRKKSAKLKLSDLCDYFHLPIDEAADHE 415
Query: 829 RLGICPTALKKICRNNRVERWPQRKIQKLNRQILDLEKSLRTKNGRPHETAKAKIERLKQ 1008
++ +CPT LKK CR + RWP RK++ L +QI L K ++ + +I+ L+
Sbjct: 416 KVKLCPTVLKKTCRKAGLPRWPHRKVKSLLKQIKLLAKQWEGQDPEARARTEREIKSLQT 475
Query: 1009 ERDRLCNGTV 1038
E + C G +
Sbjct: 476 EMIKHCGGHI 485
Score = 61.2 bits (147), Expect(3) = 3e-25
Identities = 24/48 (50%), Positives = 36/48 (75%)
Frame = +2
Query: 404 QMIDFCMRSVEDVKQYLIEYCEERKQAGFVMLQDPFLTFYDALCVGLN 547
QMIDFC +S+ ++K +L +YC ER AG++++QDP FY+ LC GL+
Sbjct: 304 QMIDFCGKSLGEIKIFLAQYCVERHLAGYILMQDPMSEFYETLCTGLD 351
Score = 26.6 bits (57), Expect(3) = 3e-25
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 310 GSYTTRLEIHGRVGIICHAI 369
G +LEIHGR+ +I HAI
Sbjct: 271 GMQFEKLEIHGRLALITHAI 290
>dbj|BAK61852.1| hypothetical protein [Citrus unshiu]
Length = 354
Score = 114 bits (285), Expect = 5e-23
Identities = 77/252 (30%), Positives = 126/252 (50%), Gaps = 8/252 (3%)
Frame = +1
Query: 310 GSYTTRLEIHGRVGIICHAILEKRHDVDSRASNDRLLHEKRRRC*AVPD*VL*REETGRI 489
G TT+LEIHGR+G+ICHAILE R ++ + I
Sbjct: 136 GHGTTKLEIHGRLGLICHAILEIRQSTNA-------------------------SQHYMI 170
Query: 490 CYVARSILNLLRCAL--CGAQLQ*ESKHI*DHLANWN*NRYTKDCL------TISTDSW* 645
+ +SI N+ + C + Q + D L+++ Y C+ ++TD +
Sbjct: 171 DFCKKSIENVKEYLVQYCEERKQAGFMMLPDPLSDF----YEAVCVGLVLDDNLTTDDY- 225
Query: 646 K*LPHGIVIRNGDCQRSHPIGESSYVRLPRSRLAAQRERTGRLKMSDIVKYFDLPIQVAS 825
+ +G+ + P E+ R R+ L+AQRERTG+L + D++ YF LPI+ A+
Sbjct: 226 ---SQPPMTNSGENEMHQPDMENEAERTTRTSLSAQRERTGKLTLRDLMIYFHLPIEEAA 282
Query: 826 QRLGICPTALKKICRNNRVERWPQRKIQKLNRQILDLEKSLRTKNGRPHETAKAKIERLK 1005
+R+ +CPT +KKICR + + RWP RKI+ + R++ LR+ + A+ +I+RL+
Sbjct: 283 RRMKLCPTVVKKICRRDGLHRWPHRKIKSIQRRMSVASGRLRSNDAEERANAQIEIQRLQ 342
Query: 1006 QERDRLCNGTVR 1041
+E C G R
Sbjct: 343 EEMAAACAGLTR 354
>ref|XP_001753386.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695265|gb|EDQ81609.1| predicted protein
[Physcomitrella patens subsp. patens]
Length = 539
Score = 109 bits (273), Expect = 1e-21
Identities = 51/101 (50%), Positives = 71/101 (70%)
Frame = +1
Query: 730 PRSRLAAQRERTGRLKMSDIVKYFDLPIQVASQRLGICPTALKKICRNNRVERWPQRKIQ 909
P+S AAQRERTG+LKM+D+ ++F LPI A++ LGICPT LKKICR N + RWP RKI+
Sbjct: 434 PKSNAAAQRERTGKLKMTDLAQHFHLPINAAAKELGICPTVLKKICRRNGMRRWPHRKIK 493
Query: 910 KLNRQILDLEKSLRTKNGRPHETAKAKIERLKQERDRLCNG 1032
+ R I LE+++ G+ E+ + +I L+ ER +LC G
Sbjct: 494 SIERIIATLEQTIAEGAGQGDESIRMEIAMLRNERAQLCAG 534
>ref|XP_002516115.1| conserved hypothetical protein [Ricinus communis]
gi|223544601|gb|EEF46117.1| conserved hypothetical
protein [Ricinus communis]
Length = 309
Score = 101 bits (251), Expect = 4e-19
Identities = 47/110 (42%), Positives = 70/110 (63%)
Frame = +1
Query: 706 GESSYVRLPRSRLAAQRERTGRLKMSDIVKYFDLPIQVASQRLGICPTALKKICRNNRVE 885
G + R+ ++ LA QRERTG+L + D YFDLPI+ A++R+ +CPT +KKICR +
Sbjct: 198 GGNDAERVMKTALAQQRERTGKLTLKDFTAYFDLPIEEAAKRMSLCPTVVKKICRRYGMN 257
Query: 886 RWPQRKIQKLNRQILDLEKSLRTKNGRPHETAKAKIERLKQERDRLCNGT 1035
RWP RKI+ + RQ+ + +R+ N A A+I+RL+QE +C T
Sbjct: 258 RWPHRKIKSMRRQMAKIRHFVRSNNSEEKARALAEIQRLQQEIANICTVT 307
>ref|XP_002308532.1| predicted protein [Populus trichocarpa] gi|222854508|gb|EEE92055.1|
predicted protein [Populus trichocarpa]
Length = 381
Score = 68.6 bits (166), Expect(2) = 5e-18
Identities = 27/45 (60%), Positives = 39/45 (86%)
Frame = +2
Query: 407 MIDFCMRSVEDVKQYLIEYCEERKQAGFVMLQDPFLTFYDALCVG 541
M DFC +S+E+VK++L +YC++R+QAGF+M+QDP FY+ALCVG
Sbjct: 200 MFDFCKKSLENVKEFLQKYCDDRRQAGFIMVQDPHSFFYEALCVG 244
Score = 49.7 bits (117), Expect(2) = 5e-18
Identities = 26/47 (55%), Positives = 29/47 (61%), Gaps = 12/47 (25%)
Frame = +1
Query: 286 EPFPFSGT------------GSYTTRLEIHGRVGIICHAILEKRHDV 390
EP PF T G+YTT+LEIHGR+GIICHAILE R V
Sbjct: 145 EPVPFQCTCCQVLREIIHTDGNYTTKLEIHGRMGIICHAILENRDHV 191
Score = 89.7 bits (221), Expect = 1e-15
Identities = 43/94 (45%), Positives = 60/94 (63%)
Frame = +1
Query: 694 SHPIGESSYVRLPRSRLAAQRERTGRLKMSDIVKYFDLPIQVASQRLGICPTALKKICRN 873
+H GE R RS LA QRER GRL + D +YF LPI+ A++RL +CPT +KKICR
Sbjct: 279 NHGEGEIETERTTRSNLALQRERAGRLTLDDFRQYFHLPIEDAARRLHLCPTVVKKICRK 338
Query: 874 NRVERWPQRKIQKLNRQILDLEKSLRTKNGRPHE 975
+ RWP RKI+ ++RQ+ DL+ L + + +
Sbjct: 339 FGMTRWPHRKIKSIHRQLTDLQVLLNSNDAEERD 372