BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027288
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-a...   128   6e-28
emb|CBI17093.3| unnamed protein product [Vitis vinifera]              128   6e-28
ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-a...   128   6e-28
ref|NP_197667.1| DNA/RNA helicase protein RAD5 [Arabidopsis thal...   127   7e-28
ref|XP_002874084.1| hypothetical protein ARALYDRAFT_489124 [Arab...   127   7e-28

>ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like [Vitis vinifera]
          Length = 1029

 Score =  128 bits (321), Expect = 6e-28
 Identities = 56/65 (86%), Positives = 62/65 (95%)
 Frame = -1

Query: 200 IKNSKSQISVATSALIADCRWCLTGTPIQNNLDDIYSLLRFLRVEPWGNWGWWNKLVQKP 21
           IK+SKSQIS+A +ALIAD RWCLTGTPIQNNL+DIYSLLRFLRVEPWGNW WWNKL+QKP
Sbjct: 578 IKSSKSQISMAAAALIADRRWCLTGTPIQNNLEDIYSLLRFLRVEPWGNWAWWNKLIQKP 637

Query: 20  FEEGD 6
           F+EGD
Sbjct: 638 FDEGD 642


>emb|CBI17093.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score =  128 bits (321), Expect = 6e-28
 Identities = 56/65 (86%), Positives = 62/65 (95%)
 Frame = -1

Query: 200 IKNSKSQISVATSALIADCRWCLTGTPIQNNLDDIYSLLRFLRVEPWGNWGWWNKLVQKP 21
           IK+SKSQIS+A +ALIAD RWCLTGTPIQNNL+DIYSLLRFLRVEPWGNW WWNKL+QKP
Sbjct: 574 IKSSKSQISMAAAALIADRRWCLTGTPIQNNLEDIYSLLRFLRVEPWGNWAWWNKLIQKP 633

Query: 20  FEEGD 6
           F+EGD
Sbjct: 634 FDEGD 638


>ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like isoform 2 [Vitis vinifera]
          Length = 1016

 Score =  128 bits (321), Expect = 6e-28
 Identities = 56/65 (86%), Positives = 62/65 (95%)
 Frame = -1

Query: 200 IKNSKSQISVATSALIADCRWCLTGTPIQNNLDDIYSLLRFLRVEPWGNWGWWNKLVQKP 21
           IK+SKSQIS+A +ALIAD RWCLTGTPIQNNL+DIYSLLRFLRVEPWGNW WWNKL+QKP
Sbjct: 565 IKSSKSQISMAAAALIADRRWCLTGTPIQNNLEDIYSLLRFLRVEPWGNWAWWNKLIQKP 624

Query: 20  FEEGD 6
           F+EGD
Sbjct: 625 FDEGD 629


>ref|NP_197667.1| DNA/RNA helicase protein RAD5 [Arabidopsis thaliana]
           gi|60390961|sp|Q9FNI6.1|SM3L2_ARATH RecName:
           Full=Putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2; Short=SMARCA3-like protein 2
           gi|10178249|dbj|BAB11681.1| DNA repair protein RAD5
           protein [Arabidopsis thaliana]
           gi|110737306|dbj|BAF00599.1| hypothetical protein
           [Arabidopsis thaliana] gi|332005687|gb|AED93070.1|
           DNA/RNA helicase protein RAD5 [Arabidopsis thaliana]
          Length = 1029

 Score =  127 bits (320), Expect = 7e-28
 Identities = 55/65 (84%), Positives = 61/65 (93%)
 Frame = -1

Query: 200 IKNSKSQISVATSALIADCRWCLTGTPIQNNLDDIYSLLRFLRVEPWGNWGWWNKLVQKP 21
           IKNSKSQIS+A +AL+AD RWCLTGTPIQNNL+D+YSLLRFLR+EPWG W WWNKLVQKP
Sbjct: 578 IKNSKSQISLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKP 637

Query: 20  FEEGD 6
           FEEGD
Sbjct: 638 FEEGD 642


>ref|XP_002874084.1| hypothetical protein ARALYDRAFT_489124 [Arabidopsis lyrata subsp.
           lyrata] gi|297319921|gb|EFH50343.1| hypothetical protein
           ARALYDRAFT_489124 [Arabidopsis lyrata subsp. lyrata]
          Length = 1029

 Score =  127 bits (320), Expect = 7e-28
 Identities = 55/65 (84%), Positives = 61/65 (93%)
 Frame = -1

Query: 200 IKNSKSQISVATSALIADCRWCLTGTPIQNNLDDIYSLLRFLRVEPWGNWGWWNKLVQKP 21
           IKNSKSQIS+A +AL+AD RWCLTGTPIQNNL+D+YSLLRFLR+EPWG W WWNKLVQKP
Sbjct: 578 IKNSKSQISLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKP 637

Query: 20  FEEGD 6
           FEEGD
Sbjct: 638 FEEGD 642