BLASTX nr result

ID: Coptis21_contig00027283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027283
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU19603.1| unknown [Glycine max]                                   60   2e-07
ref|XP_003522359.1| PREDICTED: probable protein phosphatase 2C 6...    60   3e-07
ref|XP_003526140.1| PREDICTED: probable protein phosphatase 2C 6...    60   3e-07
ref|XP_002324919.1| predicted protein [Populus trichocarpa] gi|2...    59   6e-07
ref|XP_003603284.1| hypothetical protein MTR_3g105880 [Medicago ...    57   2e-06

>gb|ACU19603.1| unknown [Glycine max]
          Length = 361

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 8/56 (14%)
 Frame = -3

Query: 344 PLRLDGNCK--------GSHSSFFGPTSRSTTCIAIVPNNHVVVASVGDYHCVISR 201
           P   DGNC+        G HS F GPTS ST C+A++ NN +VVA+ GD  CVISR
Sbjct: 132 PRSSDGNCQVDDWGLEEGPHSDFVGPTSGSTACVAVIRNNQLVVANAGDSRCVISR 187


>ref|XP_003522359.1| PREDICTED: probable protein phosphatase 2C 60-like [Glycine max]
          Length = 361

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 8/56 (14%)
 Frame = -3

Query: 344 PLRLDGNCK--------GSHSSFFGPTSRSTTCIAIVPNNHVVVASVGDYHCVISR 201
           P   DGNC+        G HS F GPTS ST C+A++ NN +VVA+ GD  CVISR
Sbjct: 132 PRSSDGNCQVDDWGLEEGPHSDFAGPTSGSTACVAVIRNNQLVVANAGDSRCVISR 187


>ref|XP_003526140.1| PREDICTED: probable protein phosphatase 2C 60-like [Glycine max]
          Length = 345

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 8/56 (14%)
 Frame = -3

Query: 344 PLRLDGNC--------KGSHSSFFGPTSRSTTCIAIVPNNHVVVASVGDYHCVISR 201
           P   DGNC        +G HS F GPTS ST C+A++ NN +VVA+ GD  CVISR
Sbjct: 132 PRSSDGNCHVDDWAFEEGPHSDFAGPTSGSTACVAVIRNNQLVVANAGDSRCVISR 187


>ref|XP_002324919.1| predicted protein [Populus trichocarpa] gi|222866353|gb|EEF03484.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = -3

Query: 320 KGSHSSFFGPTSRSTTCIAIVPNNHVVVASVGDYHCVISR 201
           +G HS F GPTS ST C+AI+ NNH++VA+ GD  CVISR
Sbjct: 148 EGPHSDFSGPTSGSTACVAIIRNNHLIVANAGDSRCVISR 187


>ref|XP_003603284.1| hypothetical protein MTR_3g105880 [Medicago truncatula]
           gi|355492332|gb|AES73535.1| hypothetical protein
           MTR_3g105880 [Medicago truncatula]
          Length = 362

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/40 (62%), Positives = 30/40 (75%)
 Frame = -3

Query: 320 KGSHSSFFGPTSRSTTCIAIVPNNHVVVASVGDYHCVISR 201
           +G HS F GPTS ST C+A++ NN VVVA+ GD  CVISR
Sbjct: 148 EGPHSDFAGPTSGSTACVAVIRNNQVVVANAGDSRCVISR 187


Top