BLASTX nr result

ID: Coptis21_contig00027281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027281
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277681.1| PREDICTED: uncharacterized protein LOC100244...   236   2e-60
ref|XP_002277660.1| PREDICTED: uncharacterized protein LOC100244...   236   2e-60
ref|XP_003520932.1| PREDICTED: OTU domain-containing protein At3...   210   1e-52
gb|AFK49612.1| unknown [Lotus japonicus]                              206   2e-51
ref|XP_003604582.1| OTU-like cysteine protease family protein ex...   205   6e-51

>ref|XP_002277681.1| PREDICTED: uncharacterized protein LOC100244154 isoform 2 [Vitis
           vinifera]
          Length = 163

 Score =  236 bits (602), Expect = 2e-60
 Identities = 114/140 (81%), Positives = 122/140 (87%)
 Frame = +3

Query: 39  VKGMAMNKGLSLSSREERDDADELRMAVKEIICESDKERRQYEEALVAITVDESLKRYCQ 218
           VKGMA NKG+++SSREERDDADELRMAVKEIIC + KERRQYEEALVAITV+ESLKRYCQ
Sbjct: 24  VKGMAFNKGIAISSREERDDADELRMAVKEIICGNGKERRQYEEALVAITVEESLKRYCQ 83

Query: 219 RIERSDFWGGESELLVLSKLCHQPVIVYIPENEHTNAGWGTGFIPIAEYGSEFXXXXXXX 398
           RIER DFWGGESELLVLSKLCHQP+IVYIPE+EHT  GW  GFIPIAEYGSEF       
Sbjct: 84  RIERPDFWGGESELLVLSKLCHQPIIVYIPEHEHTRGGWSPGFIPIAEYGSEFGKSSRNG 143

Query: 399 XPRKAVRLLYSGKNHYDLLV 458
            PR  VRLLYSGKNHYDLL+
Sbjct: 144 KPRGVVRLLYSGKNHYDLLI 163


>ref|XP_002277660.1| PREDICTED: uncharacterized protein LOC100244154 isoform 1 [Vitis
           vinifera] gi|297740254|emb|CBI30436.3| unnamed protein
           product [Vitis vinifera]
          Length = 226

 Score =  236 bits (602), Expect = 2e-60
 Identities = 114/140 (81%), Positives = 122/140 (87%)
 Frame = +3

Query: 39  VKGMAMNKGLSLSSREERDDADELRMAVKEIICESDKERRQYEEALVAITVDESLKRYCQ 218
           VKGMA NKG+++SSREERDDADELRMAVKEIIC + KERRQYEEALVAITV+ESLKRYCQ
Sbjct: 87  VKGMAFNKGIAISSREERDDADELRMAVKEIICGNGKERRQYEEALVAITVEESLKRYCQ 146

Query: 219 RIERSDFWGGESELLVLSKLCHQPVIVYIPENEHTNAGWGTGFIPIAEYGSEFXXXXXXX 398
           RIER DFWGGESELLVLSKLCHQP+IVYIPE+EHT  GW  GFIPIAEYGSEF       
Sbjct: 147 RIERPDFWGGESELLVLSKLCHQPIIVYIPEHEHTRGGWSPGFIPIAEYGSEFGKSSRNG 206

Query: 399 XPRKAVRLLYSGKNHYDLLV 458
            PR  VRLLYSGKNHYDLL+
Sbjct: 207 KPRGVVRLLYSGKNHYDLLI 226


>ref|XP_003520932.1| PREDICTED: OTU domain-containing protein At3g57810-like [Glycine
           max]
          Length = 226

 Score =  210 bits (535), Expect = 1e-52
 Identities = 104/140 (74%), Positives = 119/140 (85%)
 Frame = +3

Query: 39  VKGMAMNKGLSLSSREERDDADELRMAVKEIICESDKERRQYEEALVAITVDESLKRYCQ 218
           VKGMA NKG +L+ REER++ADELRMAVKE ICE++ ER+ YEEAL+AITVDE +KRYCQ
Sbjct: 91  VKGMAYNKGTTLNQREERENADELRMAVKEAICENEGERKLYEEALIAITVDEPIKRYCQ 150

Query: 219 RIERSDFWGGESELLVLSKLCHQPVIVYIPENEHTNAGWGTGFIPIAEYGSEFXXXXXXX 398
           RI R DFWGGESELLVLSKLC QP+IVYIPE+EH + G+G+GFIPIAEYGS+F       
Sbjct: 151 RIVRPDFWGGESELLVLSKLCKQPIIVYIPEHEHRSGGFGSGFIPIAEYGSDF----RKG 206

Query: 399 XPRKAVRLLYSGKNHYDLLV 458
             RKAVRLLYSGKNHYDLLV
Sbjct: 207 SSRKAVRLLYSGKNHYDLLV 226


>gb|AFK49612.1| unknown [Lotus japonicus]
          Length = 225

 Score =  206 bits (525), Expect = 2e-51
 Identities = 103/140 (73%), Positives = 118/140 (84%)
 Frame = +3

Query: 39  VKGMAMNKGLSLSSREERDDADELRMAVKEIICESDKERRQYEEALVAITVDESLKRYCQ 218
           VKGMA NKG++L+ REER+ ADELRMAVKE+ICE++ ER+ YEEAL+AITVDE L RYC+
Sbjct: 90  VKGMAHNKGVALNQREERESADELRMAVKEVICENEGERKLYEEALIAITVDEPLPRYCK 149

Query: 219 RIERSDFWGGESELLVLSKLCHQPVIVYIPENEHTNAGWGTGFIPIAEYGSEFXXXXXXX 398
           RI RSDFWGGESELLVLSKLC QPVIVYIPE+EH  +G G+GFIPIAEYGSEF       
Sbjct: 150 RIVRSDFWGGESELLVLSKLCKQPVIVYIPEHEHRGSGRGSGFIPIAEYGSEF----RKR 205

Query: 399 XPRKAVRLLYSGKNHYDLLV 458
             RK VRLL+SGKNHYDLL+
Sbjct: 206 SSRKVVRLLFSGKNHYDLLM 225


>ref|XP_003604582.1| OTU-like cysteine protease family protein expressed [Medicago
           truncatula] gi|355505637|gb|AES86779.1| OTU-like
           cysteine protease family protein expressed [Medicago
           truncatula] gi|388501534|gb|AFK38833.1| unknown
           [Medicago truncatula]
          Length = 229

 Score =  205 bits (521), Expect = 6e-51
 Identities = 99/140 (70%), Positives = 118/140 (84%)
 Frame = +3

Query: 39  VKGMAMNKGLSLSSREERDDADELRMAVKEIICESDKERRQYEEALVAITVDESLKRYCQ 218
           VKGMA NKG++L+ REER++ADELRMAVKE ICE+  +R+ YEEA++A+TVDE L+RYC+
Sbjct: 94  VKGMAHNKGMALNQREERENADELRMAVKEAICENVGDRKLYEEAIIAVTVDEPLQRYCR 153

Query: 219 RIERSDFWGGESELLVLSKLCHQPVIVYIPENEHTNAGWGTGFIPIAEYGSEFXXXXXXX 398
           RI + DFWGGESELLVLSKLC QP+IVYIPE+EH   GWG+GFIPIAEYGSEF       
Sbjct: 154 RIGQPDFWGGESELLVLSKLCKQPIIVYIPEHEHRGGGWGSGFIPIAEYGSEF----KKG 209

Query: 399 XPRKAVRLLYSGKNHYDLLV 458
             RKAVRLL+SGKNHYDLL+
Sbjct: 210 SSRKAVRLLFSGKNHYDLLL 229


Top