BLASTX nr result

ID: Coptis21_contig00027277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027277
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71927.1| hypothetical protein VITISV_002309 [Vitis vinifera]   102   2e-20
ref|XP_002277853.2| PREDICTED: probable disease resistance prote...    99   5e-19
ref|XP_003632789.1| PREDICTED: uncharacterized protein LOC100855...    92   6e-17
ref|XP_002299726.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
emb|CAN60664.1| hypothetical protein VITISV_007188 [Vitis vinifera]    91   1e-16

>emb|CAN71927.1| hypothetical protein VITISV_002309 [Vitis vinifera]
          Length = 1107

 Score =  102 bits (255), Expect = 2e-20
 Identities = 56/114 (49%), Positives = 74/114 (64%)
 Frame = -1

Query: 342 SRWFSCGFCTFVSSSVVSDHINVENVLIVDKADNIDVKYDHLDGLSRVLHKSARSFSVAI 163
           SRWFS G  + + SS  SD  N +NV    KA +  ++++ ++ L  VLH+SARSFS  +
Sbjct: 474 SRWFSSGVPSSMVSSAYSDQTNNKNVPPPVKAISTKMEFNRVNCLVWVLHESARSFSHTV 533

Query: 162 KHRDSVRSCPELAKAWVGVDVHAWHKHIAYQVAVYTMLKTIIEGEYMHSDEHMN 1
           +  +  R  PELA AWVGVDVHAWHK IA+QVAVY +L+T IE E+  S    N
Sbjct: 534 ESFELARCGPELAMAWVGVDVHAWHKRIAHQVAVYALLRTAIELEFFLSHGRCN 587


>ref|XP_002277853.2| PREDICTED: probable disease resistance protein At5g63020-like [Vitis
            vinifera]
          Length = 1639

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 55/114 (48%), Positives = 72/114 (63%)
 Frame = -1

Query: 342  SRWFSCGFCTFVSSSVVSDHINVENVLIVDKADNIDVKYDHLDGLSRVLHKSARSFSVAI 163
            S WFS G  + + SS  SD  N E V    KA +  ++++ ++ L  VLH+SARSFS  +
Sbjct: 1007 SMWFSSGVPSSMVSSAYSDQTNNEKVPPQVKAISTKMEFNRVNCLVWVLHESARSFSHTV 1066

Query: 162  KHRDSVRSCPELAKAWVGVDVHAWHKHIAYQVAVYTMLKTIIEGEYMHSDEHMN 1
            +     RS PELA AWV VDVHAWHK IA+QVAVY +L+T IE E++ S    N
Sbjct: 1067 ESFKLARSRPELAMAWVAVDVHAWHKRIAHQVAVYALLRTAIELEFILSHGRCN 1120


>ref|XP_003632789.1| PREDICTED: uncharacterized protein LOC100855084 [Vitis vinifera]
          Length = 323

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 50/101 (49%), Positives = 66/101 (65%)
 Frame = -1

Query: 303 SSVVSDHINVENVLIVDKADNIDVKYDHLDGLSRVLHKSARSFSVAIKHRDSVRSCPELA 124
           SS  SD  N +NV    KA +  ++++ ++ L  VLH+SARSFS  ++  +  R  PELA
Sbjct: 3   SSAYSDQTNNKNVPPPVKAISTKMEFNRVNCLVWVLHESARSFSHTVESFELARCGPELA 62

Query: 123 KAWVGVDVHAWHKHIAYQVAVYTMLKTIIEGEYMHSDEHMN 1
            AWVGVDVHAWHK IA+QVAVY +L+T IE E+  S    N
Sbjct: 63  MAWVGVDVHAWHKRIAHQVAVYALLRTAIELEFFLSHGRCN 103


>ref|XP_002299726.1| predicted protein [Populus trichocarpa] gi|222846984|gb|EEE84531.1|
           predicted protein [Populus trichocarpa]
          Length = 706

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 50/114 (43%), Positives = 70/114 (61%)
 Frame = -1

Query: 342 SRWFSCGFCTFVSSSVVSDHINVENVLIVDKADNIDVKYDHLDGLSRVLHKSARSFSVAI 163
           SR+ S    + +SSS  +  IN  N  +V + D+ +++   ++ L  VLH+SA SFS A+
Sbjct: 63  SRYISLKVLSSMSSSASTGEINDVNEAVVSRPDDKNMELTRINCLVWVLHESATSFSQAV 122

Query: 162 KHRDSVRSCPELAKAWVGVDVHAWHKHIAYQVAVYTMLKTIIEGEYMHSDEHMN 1
           +  +   S PELA AW G DVH WHK +AYQVAVY +LKT IE E + S +  N
Sbjct: 123 ESLELAGSGPELAMAWNGKDVHIWHKRLAYQVAVYALLKTAIEVEILLSHDRHN 176


>emb|CAN60664.1| hypothetical protein VITISV_007188 [Vitis vinifera]
          Length = 479

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 50/101 (49%), Positives = 65/101 (64%)
 Frame = -1

Query: 303 SSVVSDHINVENVLIVDKADNIDVKYDHLDGLSRVLHKSARSFSVAIKHRDSVRSCPELA 124
           SS  SD  N E V  + KA +  ++++ ++ L  VLH+SARSFS  ++     RS PELA
Sbjct: 3   SSTYSDQTNNEKVPPLVKAISTKMEFNRVNCLVWVLHESARSFSHTVESFKLARSRPELA 62

Query: 123 KAWVGVDVHAWHKHIAYQVAVYTMLKTIIEGEYMHSDEHMN 1
            AWV VDVHAWHK IA+QVAVY +L+T IE E+  S    N
Sbjct: 63  MAWVAVDVHAWHKRIAHQVAVYALLRTAIELEFFLSHGRCN 103


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