BLASTX nr result

ID: Coptis21_contig00027272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027272
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284968.1| PREDICTED: gibberellin 20 oxidase 3 [Vitis v...   106   2e-21
emb|CAN80138.1| hypothetical protein VITISV_028512 [Vitis vinifera]   104   6e-21
ref|XP_002298129.1| 2-oxoglutarate-dependent dioxygenase [Populu...    99   5e-19
emb|CBI36206.3| unnamed protein product [Vitis vinifera]               97   2e-18
ref|XP_002284983.1| PREDICTED: gibberellin 20 oxidase 3-like [Vi...    97   2e-18

>ref|XP_002284968.1| PREDICTED: gibberellin 20 oxidase 3 [Vitis vinifera]
           gi|297743335|emb|CBI36202.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score =  106 bits (265), Expect = 2e-21
 Identities = 59/120 (49%), Positives = 80/120 (66%), Gaps = 4/120 (3%)
 Frame = -2

Query: 350 MYSVSSQKLPVIDFSEVDCTRPGTSSWCSVRTKVRHALEAYGCFEAIFNEI--KFHGEML 177
           M S +  KLPVIDFS+ +  +PGT  W  V+ +V+ ALE YGCFEA FN++       + 
Sbjct: 1   MGSETPLKLPVIDFSDPEL-KPGTLQWNLVKAQVQKALEEYGCFEAFFNKVPLDLRKAIF 59

Query: 176 SALEELFGLPSETKAKYTAKNHFEGF-GSNPHM-LYESMGIDDALVRERLQRVTDILWPE 3
            ALEELF LP +TK + ++K  + G+ G  P + LYESMGIDDALV+E+ +  T +LWPE
Sbjct: 60  GALEELFDLPLQTKLRNSSKKPYHGYVGQYPTVPLYESMGIDDALVQEKAEHFTKLLWPE 119


>emb|CAN80138.1| hypothetical protein VITISV_028512 [Vitis vinifera]
          Length = 314

 Score =  104 bits (260), Expect = 6e-21
 Identities = 58/120 (48%), Positives = 79/120 (65%), Gaps = 4/120 (3%)
 Frame = -2

Query: 350 MYSVSSQKLPVIDFSEVDCTRPGTSSWCSVRTKVRHALEAYGCFEAIFNEI--KFHGEML 177
           M S +  KLP IDFS+ +  +PGT  W  V+ +V+ ALE YGCFEA FN++       + 
Sbjct: 1   MGSETPLKLPXIDFSDPEL-KPGTLQWNLVKAQVQKALEEYGCFEAFFNKVPLDLRKAIF 59

Query: 176 SALEELFGLPSETKAKYTAKNHFEGF-GSNPHM-LYESMGIDDALVRERLQRVTDILWPE 3
            ALEELF LP +TK + ++K  + G+ G  P + LYESMGIDDALV+E+ +  T +LWPE
Sbjct: 60  GALEELFDLPLQTKLRNSSKKPYHGYVGQYPTVPLYESMGIDDALVQEKAEHFTKLLWPE 119


>ref|XP_002298129.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
           gi|222845387|gb|EEE82934.1| 2-oxoglutarate-dependent
           dioxygenase [Populus trichocarpa]
          Length = 314

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 54/120 (45%), Positives = 77/120 (64%), Gaps = 4/120 (3%)
 Frame = -2

Query: 350 MYSVSSQKLPVIDFSEVDCTRPGTSSWCSVRTKVRHALEAYGCFEAIFNEIKFHGE--ML 177
           M S +  KLP+IDFS +    PG + W  V+ +VR ALE YGCFEA+F++I       + 
Sbjct: 1   MGSETPLKLPIIDFSNLG-QNPGAAEWDLVKLQVRKALEEYGCFEALFDKIPAESRKAIF 59

Query: 176 SALEELFGLPSETKAKYTAKNHFEGF-GSNPHM-LYESMGIDDALVRERLQRVTDILWPE 3
            A+EELF LP +TK +  +K  + G+ G  P + L+ESMGIDDA + E ++ +T ILWP+
Sbjct: 60  GAVEELFDLPLQTKMRNASKKPYHGYVGQYPQVPLFESMGIDDANIAEEVESMTTILWPQ 119


>emb|CBI36206.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 55/119 (46%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
 Frame = -2

Query: 350 MYSVSSQKLPVIDFSEVDCTRPGTSSWCSVRTKVRHALEAYGCFEAIFNEI--KFHGEML 177
           M S +  KLP+IDFSE +  +PG+ SW SV   VRHALE YGCF A +N++  + H ++ 
Sbjct: 149 MGSETHPKLPIIDFSEENL-KPGSDSWFSVCHDVRHALEEYGCFMAYYNQVPLELHNKIF 207

Query: 176 SALEELFGLPSETKAKYTAKNHFEGF-GSNP-HMLYESMGIDDALVRERLQRVTDILWP 6
           +AL ELF LP+E K K T+     G+ G  P + L+ESMGID A   E +Q    ++WP
Sbjct: 208 NALGELFDLPTEIKVKNTSDKPSHGYIGQIPAYPLHESMGIDHATNLEEIQSFAKLMWP 266


>ref|XP_002284983.1| PREDICTED: gibberellin 20 oxidase 3-like [Vitis vinifera]
          Length = 313

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 55/119 (46%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
 Frame = -2

Query: 350 MYSVSSQKLPVIDFSEVDCTRPGTSSWCSVRTKVRHALEAYGCFEAIFNEI--KFHGEML 177
           M S +  KLP+IDFSE +  +PG+ SW SV   VRHALE YGCF A +N++  + H ++ 
Sbjct: 1   MGSETHPKLPIIDFSEENL-KPGSDSWFSVCHDVRHALEEYGCFMAYYNQVPLELHNKIF 59

Query: 176 SALEELFGLPSETKAKYTAKNHFEGF-GSNP-HMLYESMGIDDALVRERLQRVTDILWP 6
           +AL ELF LP+E K K T+     G+ G  P + L+ESMGID A   E +Q    ++WP
Sbjct: 60  NALGELFDLPTEIKVKNTSDKPSHGYIGQIPAYPLHESMGIDHATNLEEIQSFAKLMWP 118


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