BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027265
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    65   2e-08
ref|NP_001055115.1| Os05g0296200 [Oryza sativa Japonica Group] g...    62   2e-07
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    58   2e-06
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi...    57   4e-06
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    56   7e-06

>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1936

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 33/73 (45%), Positives = 50/73 (68%)
 Frame = +2

Query: 503 DGEGSCPETAPQGAMSCLIWNCRGMGLPSTVRELKEVIRKSRPKLIFLCETKASVIKSNY 682
           D E + P  A  GAMSCL WNCRG+G  +TV++L+ +I+K+  +L+FLCET+ SV K + 
Sbjct: 624 DMEATSPGAA--GAMSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSR 681

Query: 683 IIRNIRSGYQSFV 721
           + R +   ++ FV
Sbjct: 682 LRRKL--AFRGFV 692


>ref|NP_001055115.1| Os05g0296200 [Oryza sativa Japonica Group]
           gi|113578666|dbj|BAF17029.1| Os05g0296200, partial
           [Oryza sativa Japonica Group]
          Length = 71

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 30/62 (48%), Positives = 39/62 (62%)
 Frame = +2

Query: 512 GSCPETAPQGAMSCLIWNCRGMGLPSTVRELKEVIRKSRPKLIFLCETKASVIKSNYIIR 691
           G   +  P GAMSCL WNCRG+G  +TVR+L  + R++  KL+FLCET+  V K   I  
Sbjct: 2   GGSYDGIPPGAMSCLSWNCRGIGNATTVRDLCALAREAGSKLVFLCETRQKVDKMRRIRN 61

Query: 692 NI 697
            I
Sbjct: 62  KI 63


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1557

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 24/48 (50%), Positives = 36/48 (75%)
 Frame = +2

Query: 530 APQGAMSCLIWNCRGMGLPSTVRELKEVIRKSRPKLIFLCETKASVIK 673
           AP GAM+CL WNCRG+G  +TV+EL  +++++  + +FLCET+  V K
Sbjct: 429 APSGAMNCLSWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDK 476


>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
          Length = 1784

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
 Frame = +2

Query: 545 MSCLIWNCRGMGLPSTVRELKEVIRKSRPKLIFLCETKASVIKSNYIIRNIRS--GYQSF 718
           MSCLIWNCRG+G  +TVR+L  + R++  +L+FLCET+ SV +    +R +RS  G + F
Sbjct: 1   MSCLIWNCRGIGNAATVRDLCALSREAGSQLVFLCETRQSVER----MRRLRSRLGLRGF 56

Query: 719 V 721
           V
Sbjct: 57  V 57


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1585

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 27/61 (44%), Positives = 41/61 (67%)
 Frame = +2

Query: 491 TQIPDGEGSCPETAPQGAMSCLIWNCRGMGLPSTVRELKEVIRKSRPKLIFLCETKASVI 670
           TQ+ D E +    A  GAM+CL WNCRG+G  +TV+EL  +++++  + +FLCET+  V 
Sbjct: 446 TQMEDMEATSSGAA--GAMNCLSWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVD 503

Query: 671 K 673
           K
Sbjct: 504 K 504