BLASTX nr result

ID: Coptis21_contig00027240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027240
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24012.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|XP_002273318.1| PREDICTED: structural maintenance of chromos...    96   3e-18
ref|XP_004167975.1| PREDICTED: structural maintenance of chromos...    96   4e-18
ref|XP_004142173.1| PREDICTED: structural maintenance of chromos...    96   4e-18
ref|XP_002312865.1| condensin complex components subunit [Populu...    95   5e-18

>emb|CBI24012.3| unnamed protein product [Vitis vinifera]
          Length = 1205

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = -3

Query: 251  DVANTQFITTTFRPELVKIVDKIYGVIHQNKVSRINVIKMEKALDFIEHDQSHNT 87
            D+ANTQFITTTFRPELVK+ DKIYGV H+N+VS +NV+  E ALDFIEHDQSHNT
Sbjct: 1150 DMANTQFITTTFRPELVKVADKIYGVTHKNRVSHVNVVSKEDALDFIEHDQSHNT 1204


>ref|XP_002273318.1| PREDICTED: structural maintenance of chromosomes protein 3-like
            [Vitis vinifera]
          Length = 1204

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = -3

Query: 251  DVANTQFITTTFRPELVKIVDKIYGVIHQNKVSRINVIKMEKALDFIEHDQSHNT 87
            D+ANTQFITTTFRPELVK+ DKIYGV H+N+VS +NV+  E ALDFIEHDQSHNT
Sbjct: 1149 DMANTQFITTTFRPELVKVADKIYGVTHKNRVSHVNVVSKEDALDFIEHDQSHNT 1203


>ref|XP_004167975.1| PREDICTED: structural maintenance of chromosomes protein 3-like,
            partial [Cucumis sativus]
          Length = 1117

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/54 (79%), Positives = 49/54 (90%)
 Frame = -3

Query: 251  DVANTQFITTTFRPELVKIVDKIYGVIHQNKVSRINVIKMEKALDFIEHDQSHN 90
            D+ANTQFITTTFRPELVK+ DKIYGV H+N+VSR+NV+  E ALDFIEHDQSHN
Sbjct: 1063 DMANTQFITTTFRPELVKVADKIYGVTHKNRVSRVNVVTKEDALDFIEHDQSHN 1116


>ref|XP_004142173.1| PREDICTED: structural maintenance of chromosomes protein 3-like
            [Cucumis sativus]
          Length = 1207

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/54 (79%), Positives = 49/54 (90%)
 Frame = -3

Query: 251  DVANTQFITTTFRPELVKIVDKIYGVIHQNKVSRINVIKMEKALDFIEHDQSHN 90
            D+ANTQFITTTFRPELVK+ DKIYGV H+N+VSR+NV+  E ALDFIEHDQSHN
Sbjct: 1153 DMANTQFITTTFRPELVKVADKIYGVTHKNRVSRVNVVTKEDALDFIEHDQSHN 1206


>ref|XP_002312865.1| condensin complex components subunit [Populus trichocarpa]
            gi|222849273|gb|EEE86820.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1205

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 42/54 (77%), Positives = 49/54 (90%)
 Frame = -3

Query: 251  DVANTQFITTTFRPELVKIVDKIYGVIHQNKVSRINVIKMEKALDFIEHDQSHN 90
            D+ANTQFITTTFRPELVK+ DK+YGV H+N+VSR+NV+  E ALDFIEHDQSHN
Sbjct: 1150 DMANTQFITTTFRPELVKVADKLYGVTHKNRVSRVNVVSKEDALDFIEHDQSHN 1203


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