BLASTX nr result

ID: Coptis21_contig00027227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027227
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30307.3| unnamed protein product [Vitis vinifera]              276   2e-72
ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2...   276   2e-72
ref|XP_002308470.1| ABC transporter family, retinal flippase sub...   254   1e-65
ref|XP_002530326.1| abc transporter, putative [Ricinus communis]...   252   4e-65
ref|XP_004149200.1| PREDICTED: ABC transporter B family member 2...   248   7e-64

>emb|CBI30307.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  276 bits (705), Expect = 2e-72
 Identities = 138/194 (71%), Positives = 165/194 (85%)
 Frame = -1

Query: 587 VLVLGRLIAHYWQEAFLWDAALNSAYKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRIT 408
           VL+L RL+A YWQ+AFLWDAALNS YK+RV+ F KVL+RDL FFE G+ VS GDIAYR+T
Sbjct: 213 VLLLARLVASYWQQAFLWDAALNSVYKVRVFAFDKVLQRDLEFFEGGDAVSPGDIAYRMT 272

Query: 407 AEVSDVADTVYALLNSILPSTLQFVAMATQMVLLNPVLTLISALVIPCISLVIAHLGETL 228
           AE SDVADTV+ALLN+I+PS LQ  AMATQM+ ++P L+LISALVIP +SLVIAHLGE L
Sbjct: 273 AEASDVADTVHALLNTIVPSALQLSAMATQMLFISPTLSLISALVIPFMSLVIAHLGERL 332

Query: 227 RQISNEAHLTVAKLSEYLNEVLPSMLFVKASNAELCECSRFQRLAHADLSKNLKKKRMKA 48
           R+IS  AHL++A LS YLNE+LPS+LFVKASNAEL E +RF+RLAH DLS+ LKK++MKA
Sbjct: 333 RKISKRAHLSIAALSAYLNEILPSILFVKASNAELSESARFRRLAHTDLSERLKKRKMKA 392

Query: 47  LIPQIVQATYVGVL 6
           LIPQI+Q  Y G L
Sbjct: 393 LIPQIMQIIYFGAL 406


>ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis
           vinifera]
          Length = 630

 Score =  276 bits (705), Expect = 2e-72
 Identities = 138/194 (71%), Positives = 165/194 (85%)
 Frame = -1

Query: 587 VLVLGRLIAHYWQEAFLWDAALNSAYKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRIT 408
           VL+L RL+A YWQ+AFLWDAALNS YK+RV+ F KVL+RDL FFE G+ VS GDIAYR+T
Sbjct: 119 VLLLARLVASYWQQAFLWDAALNSVYKVRVFAFDKVLQRDLEFFEGGDAVSPGDIAYRMT 178

Query: 407 AEVSDVADTVYALLNSILPSTLQFVAMATQMVLLNPVLTLISALVIPCISLVIAHLGETL 228
           AE SDVADTV+ALLN+I+PS LQ  AMATQM+ ++P L+LISALVIP +SLVIAHLGE L
Sbjct: 179 AEASDVADTVHALLNTIVPSALQLSAMATQMLFISPTLSLISALVIPFMSLVIAHLGERL 238

Query: 227 RQISNEAHLTVAKLSEYLNEVLPSMLFVKASNAELCECSRFQRLAHADLSKNLKKKRMKA 48
           R+IS  AHL++A LS YLNE+LPS+LFVKASNAEL E +RF+RLAH DLS+ LKK++MKA
Sbjct: 239 RKISKRAHLSIAALSAYLNEILPSILFVKASNAELSESARFRRLAHTDLSERLKKRKMKA 298

Query: 47  LIPQIVQATYVGVL 6
           LIPQI+Q  Y G L
Sbjct: 299 LIPQIMQIIYFGAL 312


>ref|XP_002308470.1| ABC transporter family, retinal flippase subfamily [Populus
           trichocarpa] gi|222854446|gb|EEE91993.1| ABC transporter
           family, retinal flippase subfamily [Populus trichocarpa]
          Length = 570

 Score =  254 bits (648), Expect = 1e-65
 Identities = 126/193 (65%), Positives = 161/193 (83%)
 Frame = -1

Query: 584 LVLGRLIAHYWQEAFLWDAALNSAYKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITA 405
           L L +LIA Y Q A LW+AALN++YKIRV+VF++VLER+LGFFE G  VS+GD+AYRITA
Sbjct: 61  LFLAKLIATYGQHALLWEAALNASYKIRVFVFERVLERELGFFEGGGAVSSGDVAYRITA 120

Query: 404 EVSDVADTVYALLNSILPSTLQFVAMATQMVLLNPVLTLISALVIPCISLVIAHLGETLR 225
           E +DVADT+YALLN+I+PS LQ  AMA++M++++P L+LISA+VIPC +L IA+LG  LR
Sbjct: 121 EAADVADTLYALLNTIVPSALQLSAMASRMLVISPALSLISAMVIPCTALAIAYLGTRLR 180

Query: 224 QISNEAHLTVAKLSEYLNEVLPSMLFVKASNAELCECSRFQRLAHADLSKNLKKKRMKAL 45
           +IS +A LT++ LS YLNEVLP++LFVKASNAE CE +RF+RLA+ADLS  L K++MKA 
Sbjct: 181 KISKKAQLTISALSAYLNEVLPAILFVKASNAEFCEIARFERLAYADLSALLTKRKMKAF 240

Query: 44  IPQIVQATYVGVL 6
           IPQIVQ  Y G L
Sbjct: 241 IPQIVQIIYFGAL 253


>ref|XP_002530326.1| abc transporter, putative [Ricinus communis]
           gi|223530130|gb|EEF32042.1| abc transporter, putative
           [Ricinus communis]
          Length = 650

 Score =  252 bits (643), Expect = 4e-65
 Identities = 123/193 (63%), Positives = 161/193 (83%)
 Frame = -1

Query: 584 LVLGRLIAHYWQEAFLWDAALNSAYKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITA 405
           L L +LIA + Q + LW AALN+ Y+IRV+VF++VL+R L FFE G+GVS+GDIAYRITA
Sbjct: 139 LFLAKLIATFGQHSLLWKAALNAGYEIRVHVFERVLKRQLAFFEGGSGVSSGDIAYRITA 198

Query: 404 EVSDVADTVYALLNSILPSTLQFVAMATQMVLLNPVLTLISALVIPCISLVIAHLGETLR 225
           + +DV+DT+YALLN++LPS LQ  AMA++M+ ++PVL+LISA+VIPC++  IA LGE LR
Sbjct: 199 QAADVSDTLYALLNTVLPSALQLSAMASRMLAISPVLSLISAMVIPCMAFAIACLGERLR 258

Query: 224 QISNEAHLTVAKLSEYLNEVLPSMLFVKASNAELCECSRFQRLAHADLSKNLKKKRMKAL 45
           +IS +AHL++A LS YLNEVLP++LFVKA+N ELCE +RFQRLAHADL+++ KKK MK L
Sbjct: 259 KISKKAHLSIATLSAYLNEVLPAILFVKANNGELCESARFQRLAHADLTEHFKKKNMKVL 318

Query: 44  IPQIVQATYVGVL 6
           IPQI+Q  Y G L
Sbjct: 319 IPQIIQIIYFGAL 331


>ref|XP_004149200.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like
           [Cucumis sativus] gi|449522662|ref|XP_004168345.1|
           PREDICTED: ABC transporter B family member 29,
           chloroplastic-like [Cucumis sativus]
          Length = 643

 Score =  248 bits (632), Expect = 7e-64
 Identities = 124/189 (65%), Positives = 153/189 (80%)
 Frame = -1

Query: 584 LVLGRLIAHYWQEAFLWDAALNSAYKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITA 405
           LV  R +A Y QEAF+WDAALN+ Y+IR+ VF++VL  DL FFE G GVS+GDIAYRITA
Sbjct: 135 LVFARFVASYCQEAFIWDAALNAIYEIRLRVFERVLAMDLDFFEGGTGVSSGDIAYRITA 194

Query: 404 EVSDVADTVYALLNSILPSTLQFVAMATQMVLLNPVLTLISALVIPCISLVIAHLGETLR 225
           E SDVADTVY+LLN+++PS LQ  AMATQM+ ++PVL+LISALVIPC++LVIA+LGE   
Sbjct: 195 EASDVADTVYSLLNTVVPSMLQLSAMATQMLAISPVLSLISALVIPCVALVIAYLGERQH 254

Query: 224 QISNEAHLTVAKLSEYLNEVLPSMLFVKASNAELCECSRFQRLAHADLSKNLKKKRMKAL 45
           +IS  A L++A LS YLNEVLP+ LFVKA++AE CE  RFQRLA  DL + LKKK+MKA 
Sbjct: 255 RISKMASLSIANLSSYLNEVLPAFLFVKANSAEFCENIRFQRLARTDLYERLKKKKMKAF 314

Query: 44  IPQIVQATY 18
           +P +VQA Y
Sbjct: 315 VPHVVQALY 323


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