BLASTX nr result

ID: Coptis21_contig00027178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027178
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263534.1| PREDICTED: uncharacterized protein LOC100242...    62   5e-08
emb|CBI39045.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|NP_001144114.1| uncharacterized protein LOC100276954 [Zea ma...    58   9e-07
ref|XP_002466459.1| hypothetical protein SORBIDRAFT_01g008120 [S...    57   2e-06
ref|XP_003559421.1| PREDICTED: uncharacterized protein LOC100824...    57   2e-06

>ref|XP_002263534.1| PREDICTED: uncharacterized protein LOC100242796 [Vitis vinifera]
          Length = 175

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 9/56 (16%)
 Frame = -3

Query: 265 ALYIAAVKQGEEPIIFGPNSILVDYGAGWKLQTVT---------SQGVEPTLEQFP 125
           AL+I AVK+GEEP+ FGPN++LVDYG GWKL+TVT          + V+PT  + P
Sbjct: 61  ALHIEAVKEGEEPVSFGPNAVLVDYGDGWKLETVTDVEFAGVGKEKRVQPTKVKIP 116


>emb|CBI39045.3| unnamed protein product [Vitis vinifera]
          Length = 176

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = -3

Query: 265 ALYIAAVKQGEEPIIFGPNSILVDYGAGWKLQTVT 161
           AL+I AVK+GEEP+ FGPN++LVDYG GWKL+TVT
Sbjct: 61  ALHIEAVKEGEEPVSFGPNAVLVDYGDGWKLETVT 95


>ref|NP_001144114.1| uncharacterized protein LOC100276954 [Zea mays]
           gi|195637082|gb|ACG38009.1| hypothetical protein [Zea
           mays]
          Length = 189

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/57 (47%), Positives = 36/57 (63%)
 Frame = -3

Query: 265 ALYIAAVKQGEEPIIFGPNSILVDYGAGWKLQTVTSQGVEPTLEQFPDVIEPMGDVQ 95
           AL++ AV+ GEEP+ FGP++ L DYG GW+LQTVT+    P +   P      GD Q
Sbjct: 67  ALHVEAVRDGEEPVSFGPSAALADYGRGWRLQTVTAHDA-PGIHHAPHADTKQGDRQ 122


>ref|XP_002466459.1| hypothetical protein SORBIDRAFT_01g008120 [Sorghum bicolor]
           gi|241920313|gb|EER93457.1| hypothetical protein
           SORBIDRAFT_01g008120 [Sorghum bicolor]
          Length = 181

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 23/37 (62%), Positives = 31/37 (83%)
 Frame = -3

Query: 265 ALYIAAVKQGEEPIIFGPNSILVDYGAGWKLQTVTSQ 155
           AL++ AV+ GEEP+ FGP++ L DYG GW+LQTVT+Q
Sbjct: 67  ALHVEAVRDGEEPVSFGPSAALADYGRGWRLQTVTAQ 103


>ref|XP_003559421.1| PREDICTED: uncharacterized protein LOC100824850 [Brachypodium
           distachyon]
          Length = 188

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/64 (45%), Positives = 38/64 (59%)
 Frame = -3

Query: 268 SALYIAAVKQGEEPIIFGPNSILVDYGAGWKLQTVTSQGVEPTLEQFPDVIEPMGDVQVA 89
           +AL++ A K GEEP+ FGP + L DYG GW+LQTVT Q    T     D  +  G+ + A
Sbjct: 78  AALHVEAAKDGEEPVCFGPTAPLADYGRGWRLQTVTEQDAPGT---HHDAKKQGGEAKGA 134

Query: 88  ADLE 77
            D E
Sbjct: 135 RDRE 138


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