BLASTX nr result
ID: Coptis21_contig00027178
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00027178 (270 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263534.1| PREDICTED: uncharacterized protein LOC100242... 62 5e-08 emb|CBI39045.3| unnamed protein product [Vitis vinifera] 62 6e-08 ref|NP_001144114.1| uncharacterized protein LOC100276954 [Zea ma... 58 9e-07 ref|XP_002466459.1| hypothetical protein SORBIDRAFT_01g008120 [S... 57 2e-06 ref|XP_003559421.1| PREDICTED: uncharacterized protein LOC100824... 57 2e-06 >ref|XP_002263534.1| PREDICTED: uncharacterized protein LOC100242796 [Vitis vinifera] Length = 175 Score = 62.0 bits (149), Expect = 5e-08 Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 9/56 (16%) Frame = -3 Query: 265 ALYIAAVKQGEEPIIFGPNSILVDYGAGWKLQTVT---------SQGVEPTLEQFP 125 AL+I AVK+GEEP+ FGPN++LVDYG GWKL+TVT + V+PT + P Sbjct: 61 ALHIEAVKEGEEPVSFGPNAVLVDYGDGWKLETVTDVEFAGVGKEKRVQPTKVKIP 116 >emb|CBI39045.3| unnamed protein product [Vitis vinifera] Length = 176 Score = 61.6 bits (148), Expect = 6e-08 Identities = 26/35 (74%), Positives = 32/35 (91%) Frame = -3 Query: 265 ALYIAAVKQGEEPIIFGPNSILVDYGAGWKLQTVT 161 AL+I AVK+GEEP+ FGPN++LVDYG GWKL+TVT Sbjct: 61 ALHIEAVKEGEEPVSFGPNAVLVDYGDGWKLETVT 95 >ref|NP_001144114.1| uncharacterized protein LOC100276954 [Zea mays] gi|195637082|gb|ACG38009.1| hypothetical protein [Zea mays] Length = 189 Score = 57.8 bits (138), Expect = 9e-07 Identities = 27/57 (47%), Positives = 36/57 (63%) Frame = -3 Query: 265 ALYIAAVKQGEEPIIFGPNSILVDYGAGWKLQTVTSQGVEPTLEQFPDVIEPMGDVQ 95 AL++ AV+ GEEP+ FGP++ L DYG GW+LQTVT+ P + P GD Q Sbjct: 67 ALHVEAVRDGEEPVSFGPSAALADYGRGWRLQTVTAHDA-PGIHHAPHADTKQGDRQ 122 >ref|XP_002466459.1| hypothetical protein SORBIDRAFT_01g008120 [Sorghum bicolor] gi|241920313|gb|EER93457.1| hypothetical protein SORBIDRAFT_01g008120 [Sorghum bicolor] Length = 181 Score = 57.0 bits (136), Expect = 2e-06 Identities = 23/37 (62%), Positives = 31/37 (83%) Frame = -3 Query: 265 ALYIAAVKQGEEPIIFGPNSILVDYGAGWKLQTVTSQ 155 AL++ AV+ GEEP+ FGP++ L DYG GW+LQTVT+Q Sbjct: 67 ALHVEAVRDGEEPVSFGPSAALADYGRGWRLQTVTAQ 103 >ref|XP_003559421.1| PREDICTED: uncharacterized protein LOC100824850 [Brachypodium distachyon] Length = 188 Score = 56.6 bits (135), Expect = 2e-06 Identities = 29/64 (45%), Positives = 38/64 (59%) Frame = -3 Query: 268 SALYIAAVKQGEEPIIFGPNSILVDYGAGWKLQTVTSQGVEPTLEQFPDVIEPMGDVQVA 89 +AL++ A K GEEP+ FGP + L DYG GW+LQTVT Q T D + G+ + A Sbjct: 78 AALHVEAAKDGEEPVCFGPTAPLADYGRGWRLQTVTEQDAPGT---HHDAKKQGGEAKGA 134 Query: 88 ADLE 77 D E Sbjct: 135 RDRE 138