BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027172
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32560.3| unnamed protein product [Vitis vinifera]              147   9e-34
ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat...   147   9e-34
ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat...   136   2e-30
ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   136   2e-30
ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat...   136   2e-30

>emb|CBI32560.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score =  147 bits (371), Expect = 9e-34
 Identities = 76/120 (63%), Positives = 90/120 (75%), Gaps = 2/120 (1%)
 Frame = -1

Query: 355 KDSVTYNTMISAYADTSSLEHEGVKVFNSMQETG--TPFDEFTLTTMLNLTAKLLVLSYG 182
           KD VTYN+M+S Y +T   E   +K+F  MQ     T  DEF+LT MLNL+AKL + SYG
Sbjct: 83  KDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDETRIDEFSLTRMLNLSAKLSMESYG 142

Query: 181 KQLHSYMVKTANDSNSFIVSSLIDMYSKCGSFDDALRVFKGSSGLLDLVSKNAMVAACCR 2
           KQLHSYMVKTAN+ + F VSSLIDMYSKCG F +  +VF G +G+LDLVSKNAMVAACCR
Sbjct: 143 KQLHSYMVKTANNISGFAVSSLIDMYSKCGCFREVCQVFDGCAGVLDLVSKNAMVAACCR 202



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/96 (35%), Positives = 56/96 (58%)
 Frame = -1

Query: 352 DSVTYNTMISAYADTSSLEHEGVKVFNSMQETGTPFDEFTLTTMLNLTAKLLVLSYGKQL 173
           D V++NT+IS Y   +  E + +K+F  M+E    ++E T+  +L+  A L  L  GK++
Sbjct: 221 DVVSWNTLISGYVQ-NGCEEDALKLFVHMEENEVRWNEHTIAGLLSACAGLRSLKLGKEV 279

Query: 172 HSYMVKTANDSNSFIVSSLIDMYSKCGSFDDALRVF 65
           H +++K     N FI S L+D+Y KCG+   A  V+
Sbjct: 280 HGWVLKYELGFNPFISSGLVDVYCKCGNMKYAELVY 315


>ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Vitis vinifera]
          Length = 670

 Score =  147 bits (371), Expect = 9e-34
 Identities = 76/120 (63%), Positives = 90/120 (75%), Gaps = 2/120 (1%)
 Frame = -1

Query: 355 KDSVTYNTMISAYADTSSLEHEGVKVFNSMQETG--TPFDEFTLTTMLNLTAKLLVLSYG 182
           KD VTYN+M+S Y +T   E   +K+F  MQ     T  DEF+LT MLNL+AKL + SYG
Sbjct: 83  KDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDETRIDEFSLTRMLNLSAKLSMESYG 142

Query: 181 KQLHSYMVKTANDSNSFIVSSLIDMYSKCGSFDDALRVFKGSSGLLDLVSKNAMVAACCR 2
           KQLHSYMVKTAN+ + F VSSLIDMYSKCG F +  +VF G +G+LDLVSKNAMVAACCR
Sbjct: 143 KQLHSYMVKTANNISGFAVSSLIDMYSKCGCFREVCQVFDGCAGVLDLVSKNAMVAACCR 202



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/96 (35%), Positives = 56/96 (58%)
 Frame = -1

Query: 352 DSVTYNTMISAYADTSSLEHEGVKVFNSMQETGTPFDEFTLTTMLNLTAKLLVLSYGKQL 173
           D V++NT+IS Y   +  E + +K+F  M+E    ++E T+  +L+  A L  L  GK++
Sbjct: 221 DVVSWNTLISGYVQ-NGCEEDALKLFVHMEENEVRWNEHTIAGLLSACAGLRSLKLGKEV 279

Query: 172 HSYMVKTANDSNSFIVSSLIDMYSKCGSFDDALRVF 65
           H +++K     N FI S L+D+Y KCG+   A  V+
Sbjct: 280 HGWVLKYELGFNPFISSGLVDVYCKCGNMKYAELVY 315


>ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Cucumis sativus]
          Length = 1096

 Score =  136 bits (343), Expect = 2e-30
 Identities = 71/120 (59%), Positives = 85/120 (70%), Gaps = 2/120 (1%)
 Frame = -1

Query: 355 KDSVTYNTMISAYADTSSLEHEGVKVFNSMQETGTPF--DEFTLTTMLNLTAKLLVLSYG 182
           KD VTYN+M+S YA +   + + +  F  MQ        DEFTL TMLNLTAKL V+SYG
Sbjct: 506 KDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITMLNLTAKLCVISYG 565

Query: 181 KQLHSYMVKTANDSNSFIVSSLIDMYSKCGSFDDALRVFKGSSGLLDLVSKNAMVAACCR 2
           KQLHS+M+KTAND   F  SSLIDMYSKCG F +A RV+ G   ++D VS+NAMVAACCR
Sbjct: 566 KQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDSVSRNAMVAACCR 625



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/88 (35%), Positives = 52/88 (59%)
 Frame = -1

Query: 352 DSVTYNTMISAYADTSSLEHEGVKVFNSMQETGTPFDEFTLTTMLNLTAKLLVLSYGKQL 173
           D V +NTMIS +   +  E E +K+F  M +    ++E T  ++L+  + L  L  GK++
Sbjct: 644 DVVAWNTMISGFVQ-NGYEEESLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEV 702

Query: 172 HSYMVKTANDSNSFIVSSLIDMYSKCGS 89
           H+Y++K    +N FI S L+D+Y KC +
Sbjct: 703 HAYVLKNRLIANPFICSGLVDVYCKCNN 730


>ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g18840-like [Cucumis
           sativus]
          Length = 1096

 Score =  136 bits (343), Expect = 2e-30
 Identities = 71/120 (59%), Positives = 85/120 (70%), Gaps = 2/120 (1%)
 Frame = -1

Query: 355 KDSVTYNTMISAYADTSSLEHEGVKVFNSMQETGTPF--DEFTLTTMLNLTAKLLVLSYG 182
           KD VTYN+M+S YA +   + + +  F  MQ        DEFTL TMLNLTAKL V+SYG
Sbjct: 506 KDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITMLNLTAKLCVISYG 565

Query: 181 KQLHSYMVKTANDSNSFIVSSLIDMYSKCGSFDDALRVFKGSSGLLDLVSKNAMVAACCR 2
           KQLHS+M+KTAND   F  SSLIDMYSKCG F +A RV+ G   ++D VS+NAMVAACCR
Sbjct: 566 KQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDSVSRNAMVAACCR 625



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/88 (35%), Positives = 52/88 (59%)
 Frame = -1

Query: 352 DSVTYNTMISAYADTSSLEHEGVKVFNSMQETGTPFDEFTLTTMLNLTAKLLVLSYGKQL 173
           D V +NTMIS +   +  E E +K+F  M +    ++E T  ++L+  + L  L  GK++
Sbjct: 644 DVVAWNTMISGFVQ-NGYEEESLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEV 702

Query: 172 HSYMVKTANDSNSFIVSSLIDMYSKCGS 89
           H+Y++K    +N FI S L+D+Y KC +
Sbjct: 703 HAYVLKNRLIANPFICSGLVDVYCKCNN 730


>ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Glycine max]
          Length = 681

 Score =  136 bits (342), Expect = 2e-30
 Identities = 69/120 (57%), Positives = 84/120 (70%), Gaps = 2/120 (1%)
 Frame = -1

Query: 355 KDSVTYNTMISAYADTSSLEHEGVKVFNSMQETGTPF--DEFTLTTMLNLTAKLLVLSYG 182
           +D V+YN+++SAY  +   E E + +F  MQ        DE TLT MLNL AKL VL YG
Sbjct: 78  RDLVSYNSLLSAYVGSDGYETEALDLFTRMQSARDTIGIDEITLTNMLNLAAKLRVLCYG 137

Query: 181 KQLHSYMVKTANDSNSFIVSSLIDMYSKCGSFDDALRVFKGSSGLLDLVSKNAMVAACCR 2
           KQ+HSYMVKTAND + F +SSLIDMYSKCG F +A  +F     ++DLVSKNAMVAACCR
Sbjct: 138 KQMHSYMVKTANDLSKFALSSLIDMYSKCGCFQEACNLFGSCDEMVDLVSKNAMVAACCR 197



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/97 (37%), Positives = 58/97 (59%)
 Frame = -1

Query: 355 KDSVTYNTMISAYADTSSLEHEGVKVFNSMQETGTPFDEFTLTTMLNLTAKLLVLSYGKQ 176
           KD+V++NT+I+ Y+    +E + +  F  M E G  F+E TL ++LN  + L     GK 
Sbjct: 215 KDTVSWNTLIAGYSQNGYME-KSLTFFVEMIENGIDFNEHTLASVLNACSALKCSKLGKS 273

Query: 175 LHSYMVKTANDSNSFIVSSLIDMYSKCGSFDDALRVF 65
           +H++++K    SN FI S ++D YSKCG+   A  V+
Sbjct: 274 VHAWVLKKGYSSNQFISSGVVDFYSKCGNIRYAELVY 310