BLASTX nr result

ID: Coptis21_contig00027168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027168
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...    65   7e-09

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
 Frame = -1

Query: 419 WRNILKLRKDAGFLALHLIGNGADTRFWQDPWHPVGILTEYFPQALRYSSVCNMESTVES 240
           W  ILKLR  A     ++IG+G  T  W D WHP   L + + +   Y S     + V  
Sbjct: 217 WGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNV 276

Query: 239 LIENGEWRIP--NHIGIH--LSGIISNMLGEVKISGERDRLVWAPSNTGVYNQRETYEAI 72
           LI+N EW+ P    IG H  +  I SN   ++   G++D LVW  S    ++ +  +E +
Sbjct: 277 LIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKM---GQKDELVWLDSPNHRFSVKVAWEQL 333

Query: 71  RNTTIPVQWHKIIWFTHRIPRHS 3
           R     V+WH I+WF + +PRHS
Sbjct: 334 RRHRQMVEWHDIVWFKNAVPRHS 356


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
 Frame = -1

Query: 419 WRNILKLRKDAGFLALHLIGNGADTRFWQDPWHPVGILTEYFPQALRYSSVCNMESTVES 240
           W  ILKLR  A     ++IG+G  T  W D WHP   L + + +   Y S     + V  
Sbjct: 35  WGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNV 94

Query: 239 LIENGEWRIP--NHIGIH--LSGIISNMLGEVKISGERDRLVWAPSNTGVYNQRETYEAI 72
           LI+N EW+ P    IG H  +  I SN   ++   G++D +VW  S    ++ +  +E +
Sbjct: 95  LIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKM---GQKDEIVWLDSPNHRFSVKVAWEQL 151

Query: 71  RNTTIPVQWHKIIWFTHRIPRHS 3
           R     V+WH I+WF + +PRHS
Sbjct: 152 RRHRHMVEWHDIVWFKNAVPRHS 174


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
 Frame = -1

Query: 419  WRNILKLRKDAGFLALHLIGNGADTRFWQDPWHPVGILTEYFPQALRYSSVCNMESTVES 240
            W  ILKLR  A     ++IG+G  T  W D WHP   L + + +   Y S     + V  
Sbjct: 750  WGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNV 809

Query: 239  LIENGEWRIP--NHIGIH--LSGIISNMLGEVKISGERDRLVWAPSNTGVYNQRETYEAI 72
            LI+N EW+ P    IG H  +  I SN   ++   G++D ++W  S    ++ +  +E +
Sbjct: 810  LIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKM---GQKDEIIWLDSPNHRFSVKVAWEQL 866

Query: 71   RNTTIPVQWHKIIWFTHRIPRHS 3
            R     V+WH I+WF + +PRHS
Sbjct: 867  RRHRQLVEWHDIVWFKNAVPRHS 889


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
 Frame = -1

Query: 419  WRNILKLRKDAGFLALHLIGNGADTRFWQDPWHPVGILTEYFPQALRYSSVCNMESTVES 240
            W  ILKLR  A     ++IG+G  T  W D WHP   L + + +   Y S     + V  
Sbjct: 1090 WGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNV 1149

Query: 239  LIENGEWRIP--NHIGIH--LSGIISNMLGEVKISGERDRLVWAPSNTGVYNQRETYEAI 72
            LI+N EW+ P    IG H  +  I SN   ++   G++D +VW  S    +  +  +E +
Sbjct: 1150 LIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKM---GQKDEIVWLDSPNHRFLVKVAWEHL 1206

Query: 71   RNTTIPVQWHKIIWFTHRIPRHS 3
            R     V+WH I+WF + +PRHS
Sbjct: 1207 RRHRQMVEWHDIVWFKNAVPRHS 1229


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
 Frame = -1

Query: 419 WRNILKLRKDAGFLALHLIGNGADTRFWQDPWHPVGILTEYF----PQALRYSSVCNMES 252
           WR + KLR+ A    +  +G+G   RFWQD W   G L        PQ +  S    + S
Sbjct: 451 WRKLCKLREVARPFVICEVGSGITARFWQDNWTGHGPLIHLTGLTGPQLVGLS----ITS 506

Query: 251 TVESLIENGEW-----RIPNHIGIHLSGIISNMLGEVKISGERDRLVWAPSN---TGVYN 96
            V   I N +W     R  N + + L  ++  + G +      D  +W   +   +  ++
Sbjct: 507 VVRDAIRNDDWWIASSRSRNPVILLLKSLLPPV-GNLVDCEHDDSYLWKVGDRVPSSKFS 565

Query: 95  QRETYEAIRNTTIPVQWHKIIWFTHRIPRHS 3
             +T+ A++  ++ V WHK +WFT+++P+H+
Sbjct: 566 TADTWRALQPFSVSVSWHKAVWFTNQVPKHA 596


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