BLASTX nr result

ID: Coptis21_contig00027165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027165
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281060.1| PREDICTED: uncharacterized protein LOC100242...   112   4e-23
ref|XP_003516862.1| PREDICTED: uncharacterized protein LOC100782...   110   9e-23
ref|XP_003518692.1| PREDICTED: uncharacterized protein LOC100806...   108   5e-22
ref|NP_001236998.1| uncharacterized LOC547474 [Glycine max] gi|1...   108   6e-22
ref|XP_003518695.1| PREDICTED: uncharacterized protein LOC100808...   108   6e-22

>ref|XP_002281060.1| PREDICTED: uncharacterized protein LOC100242198 [Vitis vinifera]
          Length = 616

 Score =  112 bits (279), Expect = 4e-23
 Identities = 56/78 (71%), Positives = 60/78 (76%)
 Frame = +2

Query: 2   SDIKDLQVKSSPPVQTPPPIYNDPAIIQSQYIHQPSMSTSLPSAGSVPVTDPSSHTAQTG 181
           SDIKDLQVKSSPPVQ  PPI NDPAIIQS Y    + S SLPS  S P+ D SSH AQ G
Sbjct: 79  SDIKDLQVKSSPPVQATPPINNDPAIIQSHYPRPATTSASLPSTVSGPLPDLSSHNAQLG 138

Query: 182 VPGSTFPGGLPLYQPGGS 235
           +PGSTF GGLPLYQPGG+
Sbjct: 139 LPGSTFQGGLPLYQPGGN 156


>ref|XP_003516862.1| PREDICTED: uncharacterized protein LOC100782890 [Glycine max]
          Length = 610

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/78 (70%), Positives = 61/78 (78%)
 Frame = +2

Query: 2   SDIKDLQVKSSPPVQTPPPIYNDPAIIQSQYIHQPSMSTSLPSAGSVPVTDPSSHTAQTG 181
           +DIKDLQVKSSPPVQ  P + NDPAIIQS Y H  S STSLPSA S  +TDPSSHT Q G
Sbjct: 80  TDIKDLQVKSSPPVQPIPQVNNDPAIIQSHYPHPVSTSTSLPSAVSGSLTDPSSHTTQLG 139

Query: 182 VPGSTFPGGLPLYQPGGS 235
           +PG+ F G LPLYQPGG+
Sbjct: 140 LPGANFQGPLPLYQPGGN 157


>ref|XP_003518692.1| PREDICTED: uncharacterized protein LOC100806432 [Glycine max]
          Length = 620

 Score =  108 bits (270), Expect = 5e-22
 Identities = 54/78 (69%), Positives = 61/78 (78%)
 Frame = +2

Query: 2   SDIKDLQVKSSPPVQTPPPIYNDPAIIQSQYIHQPSMSTSLPSAGSVPVTDPSSHTAQTG 181
           +DIKDLQVKSSPPVQ  P + NDPAIIQS Y +  + STSLPSA S  +TDPSSHT Q G
Sbjct: 80  TDIKDLQVKSSPPVQPTPQVNNDPAIIQSHYPYPVTTSTSLPSAVSGSLTDPSSHTTQLG 139

Query: 182 VPGSTFPGGLPLYQPGGS 235
           +PGS F G LPLYQPGG+
Sbjct: 140 LPGSNFLGPLPLYQPGGN 157


>ref|NP_001236998.1| uncharacterized LOC547474 [Glycine max] gi|13676413|dbj|BAB41197.1|
           hypothetical protein [Glycine max]
          Length = 620

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/78 (67%), Positives = 61/78 (78%)
 Frame = +2

Query: 2   SDIKDLQVKSSPPVQTPPPIYNDPAIIQSQYIHQPSMSTSLPSAGSVPVTDPSSHTAQTG 181
           +DIKDLQVKSSPPVQ  P + NDPAIIQS Y H  + ST+LPSA S  ++DPSSHT Q G
Sbjct: 80  TDIKDLQVKSSPPVQPTPQVNNDPAIIQSHYPHPITTSTNLPSAVSGSLSDPSSHTTQHG 139

Query: 182 VPGSTFPGGLPLYQPGGS 235
           +PGS F G LPLYQPGG+
Sbjct: 140 LPGSNFQGPLPLYQPGGN 157


>ref|XP_003518695.1| PREDICTED: uncharacterized protein LOC100808030 [Glycine max]
          Length = 616

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/78 (69%), Positives = 60/78 (76%)
 Frame = +2

Query: 2   SDIKDLQVKSSPPVQTPPPIYNDPAIIQSQYIHQPSMSTSLPSAGSVPVTDPSSHTAQTG 181
           +DIKDLQVKSSPPVQ  P + NDPAIIQS Y    + STSLPSA S  +TDPSSHT Q G
Sbjct: 80  TDIKDLQVKSSPPVQPTPQVNNDPAIIQSHYPFPVTTSTSLPSAVSGSLTDPSSHTTQLG 139

Query: 182 VPGSTFPGGLPLYQPGGS 235
           +PGS F G LPLYQPGG+
Sbjct: 140 LPGSNFQGPLPLYQPGGN 157


Top