BLASTX nr result

ID: Coptis21_contig00027162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027162
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15487.3| unnamed protein product [Vitis vinifera]               86   3e-15
ref|XP_002321488.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002321487.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002321485.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]             75   6e-12

>emb|CBI15487.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
 Frame = +1

Query: 13  QSSSCGFPGFELSCKEKEPILTMQGDEYIIREIFYGNQSFLITKAGV-SNDICSPLTYNL 189
           Q S CGFP F ++C +++P+LT+  D Y+IREIFY N SFL++ + V   D C    +N 
Sbjct: 372 QESYCGFPNFSITCNDEKPVLTISDDYYVIREIFYTNHSFLMSNSAVYDGDSCPTPLHNF 431

Query: 190 SLSHTAFTVFPATDNLLLFFNCTAL 264
           SL  T F   P+  +LLLF+NCT++
Sbjct: 432 SLDRTPFNYSPSHYDLLLFYNCTSV 456


>ref|XP_002321488.1| predicted protein [Populus trichocarpa] gi|222868484|gb|EEF05615.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/86 (39%), Positives = 47/86 (54%)
 Frame = +1

Query: 1   INGNQSSSCGFPGFELSCKEKEPILTMQGDEYIIREIFYGNQSFLITKAGVSNDICSPLT 180
           ++  Q   CG P F L+C +K P LT+  D YII++I Y   S  +  A V  + C PL 
Sbjct: 56  LSQEQEPFCGHPNFMLTCSDKRPALTISNDVYIIKDISYATNSMRVANAAVYEETCPPLL 115

Query: 181 YNLSLSHTAFTVFPATDNLLLFFNCT 258
           +N+SL  T  T+ P   N   F+NCT
Sbjct: 116 HNISLDRTPLTISPGYTNFSFFYNCT 141


>ref|XP_002321487.1| predicted protein [Populus trichocarpa] gi|222868483|gb|EEF05614.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/86 (39%), Positives = 47/86 (54%)
 Frame = +1

Query: 1   INGNQSSSCGFPGFELSCKEKEPILTMQGDEYIIREIFYGNQSFLITKAGVSNDICSPLT 180
           ++  Q   CG P F L+C +K P LT+  D YII++I Y   S  +  A V  + C PL 
Sbjct: 56  LSQEQEPFCGHPNFMLTCSDKRPALTISNDVYIIKDISYATNSMRVANAAVYEETCPPLL 115

Query: 181 YNLSLSHTAFTVFPATDNLLLFFNCT 258
           +N+SL  T  T+ P   N   F+NCT
Sbjct: 116 HNISLDRTPLTISPGYTNFSFFYNCT 141


>ref|XP_002321485.1| predicted protein [Populus trichocarpa] gi|222868481|gb|EEF05612.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/86 (39%), Positives = 47/86 (54%)
 Frame = +1

Query: 1   INGNQSSSCGFPGFELSCKEKEPILTMQGDEYIIREIFYGNQSFLITKAGVSNDICSPLT 180
           ++  Q   CG P F L+C +K P LT+  D YII++I Y   S  +  A V  + C PL 
Sbjct: 56  LSQEQEPFCGHPNFMLTCSDKRPALTISNDVYIIKDISYATNSMRVANAAVYEETCPPLL 115

Query: 181 YNLSLSHTAFTVFPATDNLLLFFNCT 258
           +N+SL  T  T+ P   N   F+NCT
Sbjct: 116 HNISLDRTPLTISPGYTNFSFFYNCT 141


>gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
          Length = 1154

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
 Frame = +1

Query: 1   INGNQSSSCGFPGFELSC--KEKEPILTMQGDEYIIREIFYGNQSFLITKAGVSNDICSP 174
           ++G Q S CG+P FEL+C  +EK P+L + G+EY+I+ I Y  QSF +  +  S+D C  
Sbjct: 280 LSGKQESFCGYPSFELTCDDEEKLPVLGISGEEYVIKNISYLTQSFQVVNSKASHDPCPR 339

Query: 175 LTYNLSLSHTAFTVFPATDNLLLFFNCT 258
              NL+L  T F V P+  N  + +NC+
Sbjct: 340 PLNNLTLHRTPFFVNPSHINFTILYNCS 367


Top