BLASTX nr result

ID: Coptis21_contig00027160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027160
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283252.1| PREDICTED: actin-related protein 5 [Vitis vi...   191   5e-47
ref|XP_003552874.1| PREDICTED: actin-related protein 5-like [Gly...   188   3e-46
emb|CAN74904.1| hypothetical protein VITISV_042044 [Vitis vinifera]   186   2e-45
ref|XP_004147683.1| PREDICTED: actin-related protein 5-like [Cuc...   184   6e-45
ref|XP_003519352.1| PREDICTED: actin-related protein 5-like isof...   184   6e-45

>ref|XP_002283252.1| PREDICTED: actin-related protein 5 [Vitis vinifera]
            gi|296086213|emb|CBI31654.3| unnamed protein product
            [Vitis vinifera]
          Length = 725

 Score =  191 bits (485), Expect = 5e-47
 Identities = 92/139 (66%), Positives = 108/139 (77%)
 Frame = +3

Query: 3    EDFQITFGVERFRCPEILFQPNMVGVDQAGLDEMAGISMQRFPLKGSAIEERITNSILVT 182
            EDFQI FGVERFRCPEILF PN+VGVDQ G+DEMAG+S++R P +   + ER+TNSIL+T
Sbjct: 587  EDFQIVFGVERFRCPEILFHPNLVGVDQVGVDEMAGVSIRRLPSRSQGLNERMTNSILLT 646

Query: 183  GGSSRFPGIVERLEAGIRKVRPFESLIRVVRASDPVLDAWRXXXXXXXXXXXXVQTFNRD 362
            GGS  FPGI ERLEAGIR +RP  S IRVVRASDPVLDAWR             QTF++ 
Sbjct: 647  GGSCLFPGIRERLEAGIRMIRPCGSPIRVVRASDPVLDAWRGAAVYAASLQFPGQTFSKT 706

Query: 363  DYFKKGEDWLRQYRLRYTI 419
            DY++KGEDWLR+Y LRYT+
Sbjct: 707  DYYEKGEDWLRRYTLRYTL 725


>ref|XP_003552874.1| PREDICTED: actin-related protein 5-like [Glycine max]
          Length = 723

 Score =  188 bits (478), Expect = 3e-46
 Identities = 89/139 (64%), Positives = 109/139 (78%)
 Frame = +3

Query: 3    EDFQITFGVERFRCPEILFQPNMVGVDQAGLDEMAGISMQRFPLKGSAIEERITNSILVT 182
            EDFQI FGVERFRCPEILF PN + VDQAGLDEMAG+S++R   K  ++EER+T+SILVT
Sbjct: 585  EDFQIVFGVERFRCPEILFNPNWIAVDQAGLDEMAGVSIRRLSCKDESLEERLTSSILVT 644

Query: 183  GGSSRFPGIVERLEAGIRKVRPFESLIRVVRASDPVLDAWRXXXXXXXXXXXXVQTFNRD 362
            GGSS FPGI+ERLEAGIR +RP  + I+VVRA DPV+DAWR             QTF+R 
Sbjct: 645  GGSSLFPGIIERLEAGIRMIRPCGAPIKVVRALDPVMDAWRGAAAFASAPQFHTQTFSRM 704

Query: 363  DYFKKGEDWLRQYRLRYTI 419
            DYF+KGEDWLR Y+++Y++
Sbjct: 705  DYFEKGEDWLRSYQIKYSL 723


>emb|CAN74904.1| hypothetical protein VITISV_042044 [Vitis vinifera]
          Length = 607

 Score =  186 bits (471), Expect = 2e-45
 Identities = 90/136 (66%), Positives = 105/136 (77%)
 Frame = +3

Query: 3   EDFQITFGVERFRCPEILFQPNMVGVDQAGLDEMAGISMQRFPLKGSAIEERITNSILVT 182
           EDFQI FGVERFRCPEILF PN+VGVDQ G+DEMAG+S++R P +   + ER+TNSIL+T
Sbjct: 453 EDFQIVFGVERFRCPEILFHPNLVGVDQVGVDEMAGVSIRRLPSRSQGLNERMTNSILLT 512

Query: 183 GGSSRFPGIVERLEAGIRKVRPFESLIRVVRASDPVLDAWRXXXXXXXXXXXXVQTFNRD 362
           GGS  FPGI ERLEAGIR +RP  S IRVVRASDPVLDAWR             QTF++ 
Sbjct: 513 GGSCLFPGIRERLEAGIRMIRPCGSPIRVVRASDPVLDAWRGAAVYAASLQFPGQTFSKT 572

Query: 363 DYFKKGEDWLRQYRLR 410
           DY++KGEDWLR+Y LR
Sbjct: 573 DYYEKGEDWLRRYTLR 588


>ref|XP_004147683.1| PREDICTED: actin-related protein 5-like [Cucumis sativus]
           gi|449503255|ref|XP_004161911.1| PREDICTED:
           actin-related protein 5-like [Cucumis sativus]
          Length = 720

 Score =  184 bits (467), Expect = 6e-45
 Identities = 89/139 (64%), Positives = 104/139 (74%)
 Frame = +3

Query: 3   EDFQITFGVERFRCPEILFQPNMVGVDQAGLDEMAGISMQRFPLKGSAIEERITNSILVT 182
           EDFQI  GVERFRCPEILF PN +GVDQ GLDEM G+S++R P     I ER+TNSIL+T
Sbjct: 582 EDFQIVMGVERFRCPEILFHPNWIGVDQTGLDEMTGVSLRRLPSYSDDIAERLTNSILIT 641

Query: 183 GGSSRFPGIVERLEAGIRKVRPFESLIRVVRASDPVLDAWRXXXXXXXXXXXXVQTFNRD 362
           GGS  FPGI ERLEAGIR +RP  S IRVVRA DP+LDAWR             QTF+R 
Sbjct: 642 GGSCLFPGIRERLEAGIRMIRPCGSPIRVVRALDPILDAWRGASVYAAASQFTTQTFSRL 701

Query: 363 DYFKKGEDWLRQYRLRYTI 419
           DY++KGEDWLR+Y+LRY++
Sbjct: 702 DYYEKGEDWLRRYQLRYSL 720


>ref|XP_003519352.1| PREDICTED: actin-related protein 5-like isoform 2 [Glycine max]
          Length = 728

 Score =  184 bits (467), Expect = 6e-45
 Identities = 86/139 (61%), Positives = 108/139 (77%)
 Frame = +3

Query: 3    EDFQITFGVERFRCPEILFQPNMVGVDQAGLDEMAGISMQRFPLKGSAIEERITNSILVT 182
            EDFQI  GVERFRCPE+LF PN + VDQ GLDEM G+S++R P K  ++E+R+T+SILVT
Sbjct: 590  EDFQIFLGVERFRCPELLFNPNWIAVDQVGLDEMVGVSIRRLPYKDESLEQRLTSSILVT 649

Query: 183  GGSSRFPGIVERLEAGIRKVRPFESLIRVVRASDPVLDAWRXXXXXXXXXXXXVQTFNRD 362
            GGSS FPGIVERLEAGIR +RP  + I++VRA DPV+DAWR            +QTF+R 
Sbjct: 650  GGSSLFPGIVERLEAGIRMIRPCGTPIKIVRALDPVMDAWRGAASFASDPQFHMQTFSRL 709

Query: 363  DYFKKGEDWLRQYRLRYTI 419
            DY++KGEDWLR Y+L+YT+
Sbjct: 710  DYYEKGEDWLRNYQLQYTL 728


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