BLASTX nr result
ID: Coptis21_contig00027159
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00027159
(733 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|2... 284 1e-74
ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containi... 262 5e-68
ref|XP_003624339.1| Pentatricopeptide repeat-containing protein ... 245 8e-63
gb|ACU18704.1| unknown [Glycine max] 241 9e-62
ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containi... 239 4e-61
>ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|222837367|gb|EEE75746.1|
predicted protein [Populus trichocarpa]
Length = 484
Score = 284 bits (727), Expect = 1e-74
Identities = 136/209 (65%), Positives = 169/209 (80%)
Frame = +1
Query: 1 EKKRLNCLEESYTIVIRALCDVRRVEEACQLFGQMLSQELKPKLVLYNSLICMLCKLGNV 180
E+++ NC+ E Y+IV++ALC+ R VEEA LFG+MLS ELKPKLV+YNS+ICMLCK+G +
Sbjct: 272 EERKQNCVAEGYSIVMQALCEYRLVEEASHLFGRMLSLELKPKLVVYNSIICMLCKVGRL 331
Query: 181 DKADRLFEIMNKRRCGPDNVTYTALIHGYGGAHNWEAAYGLLMEMLKMGWCPHFHTYSLV 360
D A R+F+IM+K+RC PD+VTYTAL+H YG A NWE AY LLMEML +GW PHFH Y+LV
Sbjct: 332 DDAQRVFQIMSKKRCLPDSVTYTALVHAYGEARNWEVAYDLLMEMLGLGWIPHFHAYTLV 391
Query: 361 DKLLKEHGRSDLALKLEGKLDIQLLNKHCKAGQLEAAHEKLSSMLERGFNLPVYTRDAFI 540
DKLL+EHGR DL+ KLE KL+ Q+L+KHCKAGQLEAA+EKL SMLE+GF P+Y RDAF
Sbjct: 392 DKLLREHGRIDLSNKLERKLESQILHKHCKAGQLEAAYEKLRSMLEKGFYPPMYVRDAFE 451
Query: 541 RAFQKAGKREIALDLLKKVEHDVSQSTIE 627
AFQK GK EIA +LL+ ++ ST E
Sbjct: 452 HAFQKYGKLEIARELLENMDKACEPSTTE 480
>ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449484825|ref|XP_004156991.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 579
Score = 262 bits (670), Expect = 5e-68
Identities = 123/200 (61%), Positives = 158/200 (79%)
Frame = +1
Query: 1 EKKRLNCLEESYTIVIRALCDVRRVEEACQLFGQMLSQELKPKLVLYNSLICMLCKLGNV 180
E +L C EE Y++V++ALC+ R V+EA LFG+MLSQ +KPKL +YN +ICMLCKLGN+
Sbjct: 367 EGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAIYNYVICMLCKLGNL 426
Query: 181 DKADRLFEIMNKRRCGPDNVTYTALIHGYGGAHNWEAAYGLLMEMLKMGWCPHFHTYSLV 360
D A+R+F IMNK+RC PD+VTY+ALIH YG +W AAYGLL EML +G PHFH YS+V
Sbjct: 427 DSAERVFGIMNKKRCAPDHVTYSALIHAYGENRDWSAAYGLLKEMLSLGMSPHFHVYSIV 486
Query: 361 DKLLKEHGRSDLALKLEGKLDIQLLNKHCKAGQLEAAHEKLSSMLERGFNLPVYTRDAFI 540
DKL++EHG+ DL LKLE K + Q+L K CK GQLEAA+EK+ SMLE+G + P+Y RDAF
Sbjct: 487 DKLMREHGQIDLCLKLEMKWEAQILQKLCKQGQLEAAYEKMKSMLEKGLSPPIYVRDAFE 546
Query: 541 RAFQKAGKREIALDLLKKVE 600
AFQK GK +IA +LL+K++
Sbjct: 547 SAFQKKGKFKIARELLQKMD 566
>ref|XP_003624339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499354|gb|AES80557.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 578
Score = 245 bits (625), Expect = 8e-63
Identities = 122/198 (61%), Positives = 149/198 (75%)
Frame = +1
Query: 1 EKKRLNCLEESYTIVIRALCDVRRVEEACQLFGQMLSQELKPKLVLYNSLICMLCKLGNV 180
E+K+L C++E Y+IVI+ALCD RRVEEA +LFG+ML LKPKLV+YNS+I MLCKLG++
Sbjct: 368 EEKKLTCVQEGYSIVIKALCDHRRVEEAGKLFGRMLEIGLKPKLVVYNSVISMLCKLGDL 427
Query: 181 DKADRLFEIMNKRRCGPDNVTYTALIHGYGGAHNWEAAYGLLMEMLKMGWCPHFHTYSLV 360
D A+ +FEIMNK RC PD++TY ALIH NW+ AY LLMEML +GW PHFHTY+LV
Sbjct: 428 DNANGVFEIMNKNRCFPDSITYIALIHAQCACKNWKVAYELLMEMLGLGWIPHFHTYNLV 487
Query: 361 DKLLKEHGRSDLALKLEGKLDIQLLNKHCKAGQLEAAHEKLSSMLERGFNLPVYTRDAFI 540
D LL+EH + DL KLE KL+ Q L K CK GQL A+EK+ +MLE+G L Y RD F
Sbjct: 488 DSLLREHDQLDLCHKLERKLENQKLLKLCKEGQLGDAYEKVKAMLEKGVRLSAYARDTFE 547
Query: 541 RAFQKAGKREIALDLLKK 594
FQK GK EIA DLL+K
Sbjct: 548 HEFQKCGKLEIAHDLLEK 565
>gb|ACU18704.1| unknown [Glycine max]
Length = 367
Score = 241 bits (616), Expect = 9e-62
Identities = 117/200 (58%), Positives = 149/200 (74%)
Frame = +1
Query: 1 EKKRLNCLEESYTIVIRALCDVRRVEEACQLFGQMLSQELKPKLVLYNSLICMLCKLGNV 180
E+++L ++E Y++VI ALC+ RVEEA LFG+MLS LKPKLV+YNS+I MLCK G +
Sbjct: 157 EERKLTSVQEGYSVVINALCECCRVEEASDLFGRMLSCGLKPKLVVYNSVISMLCKFGKL 216
Query: 181 DKADRLFEIMNKRRCGPDNVTYTALIHGYGGAHNWEAAYGLLMEMLKMGWCPHFHTYSLV 360
A R+FEIMNK RC PD +TYTALIH +G NW+ +Y LLMEML +GW PHFHT++LV
Sbjct: 217 KDATRVFEIMNKNRCLPDGLTYTALIHSHGEVRNWKVSYDLLMEMLGLGWIPHFHTFNLV 276
Query: 361 DKLLKEHGRSDLALKLEGKLDIQLLNKHCKAGQLEAAHEKLSSMLERGFNLPVYTRDAFI 540
+ LL+EHG+ DL +KLE KL+ Q L K CK G+L+AA+EK SMLE+G L Y RD F
Sbjct: 277 ESLLREHGQLDLCVKLERKLENQKLQKLCKGGELDAAYEKARSMLEKGIPLSAYARDIFQ 336
Query: 541 RAFQKAGKREIALDLLKKVE 600
+ FQK GK +IA LL+K E
Sbjct: 337 QVFQKCGKIKIARQLLEKTE 356
>ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 367
Score = 239 bits (610), Expect = 4e-61
Identities = 116/200 (58%), Positives = 148/200 (74%)
Frame = +1
Query: 1 EKKRLNCLEESYTIVIRALCDVRRVEEACQLFGQMLSQELKPKLVLYNSLICMLCKLGNV 180
E+++L ++E Y++VI ALC+ RVEEA LFG+MLS LKPKLV+YNS+I MLCK G +
Sbjct: 157 EERKLTSVQEGYSVVINALCECCRVEEASDLFGRMLSCGLKPKLVVYNSVISMLCKFGKL 216
Query: 181 DKADRLFEIMNKRRCGPDNVTYTALIHGYGGAHNWEAAYGLLMEMLKMGWCPHFHTYSLV 360
A R+FEIMNK RC PD +TYTALIH +G NW+ +Y LLMEML +GW PHFHT++LV
Sbjct: 217 KDATRVFEIMNKNRCLPDGLTYTALIHSHGEVRNWKVSYDLLMEMLGLGWIPHFHTFNLV 276
Query: 361 DKLLKEHGRSDLALKLEGKLDIQLLNKHCKAGQLEAAHEKLSSMLERGFNLPVYTRDAFI 540
+ LL+EH + DL +KLE KL+ Q L K CK G+L+AA+EK SMLE+G L Y RD F
Sbjct: 277 ESLLREHDQLDLCVKLERKLENQKLQKLCKGGELDAAYEKAQSMLEKGIPLSAYARDIFQ 336
Query: 541 RAFQKAGKREIALDLLKKVE 600
+ FQK GK +IA LL+K E
Sbjct: 337 QVFQKCGKIKIARQLLEKTE 356