BLASTX nr result

ID: Coptis21_contig00027157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027157
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279517.2| PREDICTED: scarecrow-like protein 32 [Vitis ...   217   7e-55
emb|CBI33711.3| unnamed protein product [Vitis vinifera]              217   7e-55
emb|CAN62656.1| hypothetical protein VITISV_023403 [Vitis vinifera]   217   7e-55
ref|XP_002304316.1| GRAS family transcription factor [Populus tr...   207   7e-52
gb|ADL36818.1| SCL domain class transcription factor [Malus x do...   204   5e-51

>ref|XP_002279517.2| PREDICTED: scarecrow-like protein 32 [Vitis vinifera]
          Length = 454

 Score =  217 bits (553), Expect = 7e-55
 Identities = 101/116 (87%), Positives = 112/116 (96%)
 Frame = -3

Query: 350 LHQTRPWPGFPTSKSLGSFGDANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGD 171
           +H+TRPWPGFPTSK+LGSFGDANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGD
Sbjct: 27  IHRTRPWPGFPTSKALGSFGDANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGD 86

Query: 170 SNQRLTCGFLRALIARAGKTGSCKLLTAMANSNPNLSIHTHKFSVIELASFIDLTP 3
           SNQRLTCGFLRALIARA  +G+CK+ TAMAN++ NL+I+THKFSVIELASF+DLTP
Sbjct: 87  SNQRLTCGFLRALIARAANSGTCKMFTAMANAHANLAINTHKFSVIELASFVDLTP 142


>emb|CBI33711.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  217 bits (553), Expect = 7e-55
 Identities = 101/116 (87%), Positives = 112/116 (96%)
 Frame = -3

Query: 350 LHQTRPWPGFPTSKSLGSFGDANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGD 171
           +H+TRPWPGFPTSK+LGSFGDANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGD
Sbjct: 28  IHRTRPWPGFPTSKALGSFGDANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGD 87

Query: 170 SNQRLTCGFLRALIARAGKTGSCKLLTAMANSNPNLSIHTHKFSVIELASFIDLTP 3
           SNQRLTCGFLRALIARA  +G+CK+ TAMAN++ NL+I+THKFSVIELASF+DLTP
Sbjct: 88  SNQRLTCGFLRALIARAANSGTCKMFTAMANAHANLAINTHKFSVIELASFVDLTP 143


>emb|CAN62656.1| hypothetical protein VITISV_023403 [Vitis vinifera]
          Length = 455

 Score =  217 bits (553), Expect = 7e-55
 Identities = 101/116 (87%), Positives = 112/116 (96%)
 Frame = -3

Query: 350 LHQTRPWPGFPTSKSLGSFGDANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGD 171
           +H+TRPWPGFPTSK+LGSFGDANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGD
Sbjct: 28  IHRTRPWPGFPTSKALGSFGDANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGD 87

Query: 170 SNQRLTCGFLRALIARAGKTGSCKLLTAMANSNPNLSIHTHKFSVIELASFIDLTP 3
           SNQRLTCGFLRALIARA  +G+CK+ TAMAN++ NL+I+THKFSVIELASF+DLTP
Sbjct: 88  SNQRLTCGFLRALIARAANSGTCKMFTAMANAHANLAINTHKFSVIELASFVDLTP 143


>ref|XP_002304316.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222841748|gb|EEE79295.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 451

 Score =  207 bits (527), Expect = 7e-52
 Identities = 97/116 (83%), Positives = 108/116 (93%)
 Frame = -3

Query: 350 LHQTRPWPGFPTSKSLGSFGDANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGD 171
           +++ RPWPGFPTSKSLGSFGDANCMEQLLVHC NAIESNDATL+QQILWVLNNIAPPDGD
Sbjct: 23  MNRNRPWPGFPTSKSLGSFGDANCMEQLLVHCVNAIESNDATLSQQILWVLNNIAPPDGD 82

Query: 170 SNQRLTCGFLRALIARAGKTGSCKLLTAMANSNPNLSIHTHKFSVIELASFIDLTP 3
           SNQRLTC FLRALIARA K+G+CKLL AM N++ NL+I THKFS+IELASF+DLTP
Sbjct: 83  SNQRLTCAFLRALIARAAKSGTCKLLAAMENAHCNLAIDTHKFSIIELASFVDLTP 138


>gb|ADL36818.1| SCL domain class transcription factor [Malus x domestica]
          Length = 450

 Score =  204 bits (520), Expect = 5e-51
 Identities = 99/116 (85%), Positives = 105/116 (90%), Gaps = 1/116 (0%)
 Frame = -3

Query: 347 HQTRPWPGFPTSKSLGS-FGDANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGD 171
           H+TRPWPGFPT KSLG+ FGDANCMEQLLVHCANAIE+NDATL QQILWVLNNIAP DGD
Sbjct: 8   HRTRPWPGFPTPKSLGTNFGDANCMEQLLVHCANAIETNDATLTQQILWVLNNIAPQDGD 67

Query: 170 SNQRLTCGFLRALIARAGKTGSCKLLTAMANSNPNLSIHTHKFSVIELASFIDLTP 3
           SNQRLTC FLRALIARA + GSCK+L AMANS  N +IHTHKFSVIELASFIDLTP
Sbjct: 68  SNQRLTCAFLRALIARAARIGSCKVLAAMANSQANFTIHTHKFSVIELASFIDLTP 123


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