BLASTX nr result

ID: Coptis21_contig00027149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027149
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299733.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002284032.1| PREDICTED: uncharacterized protein LOC100249...    68   7e-10

>ref|XP_002299733.1| predicted protein [Populus trichocarpa] gi|222846991|gb|EEE84538.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/82 (43%), Positives = 50/82 (60%)
 Frame = -1

Query: 301 IIQKMDSVESSNAFIEGLKPVVPIEEMEQIVERRHQIQKLTVDCKETIVPAVDPFNDCAC 122
           + QKM+  E+S+ FI GL+PVV I+EM QI     +     V+CKE     +D    C+C
Sbjct: 38  VAQKMEPEEASDVFINGLRPVVSIKEMSQIEGNGDRHDHKVVECKEKTAEIIDRPCQCSC 97

Query: 121 ITPSVVDSPDLAPIREPLSAPF 56
           I P  ++SPD   ++EPLSAPF
Sbjct: 98  I-PKDIESPDQLNLKEPLSAPF 118


>ref|XP_002284032.1| PREDICTED: uncharacterized protein LOC100249817 [Vitis vinifera]
           gi|297743214|emb|CBI36081.3| unnamed protein product
           [Vitis vinifera]
          Length = 110

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/84 (45%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
 Frame = -1

Query: 301 IIQKMDSVESSNAFIEGLKPVVPIEEMEQI--VERRHQIQKLTVDCKETIVPAVDPFNDC 128
           I+QKM+  E+SN F +G++ VV ++EMEQ+  +  + Q++KL  +C ET  PA+     C
Sbjct: 30  IVQKMEPKEASNVFADGMRQVVTVKEMEQLEQMAEKEQLEKL-AECNET-APAIGGPCQC 87

Query: 127 ACITPSVVDSPDLAPIREPLSAPF 56
           +C  P+ ++SPD A  REPLSAPF
Sbjct: 88  SCF-PTNLESPDQAGPREPLSAPF 110


Top