BLASTX nr result
ID: Coptis21_contig00027148
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00027148 (238 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004141143.1| PREDICTED: uncharacterized protein LOC101206... 95 7e-18 gb|AAK43900.1|AF370523_1 Unknown protein [Arabidopsis thaliana] ... 92 4e-17 ref|NP_568361.1| CCR4-NOT transcription complex subunit 3 [Arabi... 92 4e-17 dbj|BAB09481.1| unnamed protein product [Arabidopsis thaliana] 92 4e-17 ref|XP_002873878.1| transcription regulator NOT2/NOT3/NOT5 famil... 92 4e-17 >ref|XP_004141143.1| PREDICTED: uncharacterized protein LOC101206210 [Cucumis sativus] gi|449509538|ref|XP_004163617.1| PREDICTED: uncharacterized LOC101206210 [Cucumis sativus] Length = 900 Score = 94.7 bits (234), Expect = 7e-18 Identities = 44/56 (78%), Positives = 51/56 (91%) Frame = +1 Query: 70 DPRDKAKSEKRDWLNNVVSELESEVHSFEAEIEGLFVKKGMARPPRLIHLETSIAQ 237 DP++KAKSE RDWLNNVVSELES++ +FEAEIEGL VKKG ARPPRL+HLETSI + Sbjct: 122 DPKEKAKSETRDWLNNVVSELESQIDNFEAEIEGLSVKKGKARPPRLVHLETSITR 177 >gb|AAK43900.1|AF370523_1 Unknown protein [Arabidopsis thaliana] gi|25084156|gb|AAN72188.1| Unknown protein [Arabidopsis thaliana] Length = 843 Score = 92.0 bits (227), Expect = 4e-17 Identities = 43/56 (76%), Positives = 49/56 (87%) Frame = +1 Query: 70 DPRDKAKSEKRDWLNNVVSELESEVHSFEAEIEGLFVKKGMARPPRLIHLETSIAQ 237 DP++KAKSE RDWLNNVVSELES++ SFEAE+EGL VKKG RPPRL HLETSI + Sbjct: 122 DPKEKAKSETRDWLNNVVSELESQIDSFEAELEGLSVKKGKTRPPRLTHLETSITR 177 >ref|NP_568361.1| CCR4-NOT transcription complex subunit 3 [Arabidopsis thaliana] gi|332005138|gb|AED92521.1| CCR4-NOT transcription complex subunit 3 [Arabidopsis thaliana] Length = 843 Score = 92.0 bits (227), Expect = 4e-17 Identities = 43/56 (76%), Positives = 49/56 (87%) Frame = +1 Query: 70 DPRDKAKSEKRDWLNNVVSELESEVHSFEAEIEGLFVKKGMARPPRLIHLETSIAQ 237 DP++KAKSE RDWLNNVVSELES++ SFEAE+EGL VKKG RPPRL HLETSI + Sbjct: 122 DPKEKAKSETRDWLNNVVSELESQIDSFEAELEGLSVKKGKTRPPRLTHLETSITR 177 >dbj|BAB09481.1| unnamed protein product [Arabidopsis thaliana] Length = 889 Score = 92.0 bits (227), Expect = 4e-17 Identities = 43/56 (76%), Positives = 49/56 (87%) Frame = +1 Query: 70 DPRDKAKSEKRDWLNNVVSELESEVHSFEAEIEGLFVKKGMARPPRLIHLETSIAQ 237 DP++KAKSE RDWLNNVVSELES++ SFEAE+EGL VKKG RPPRL HLETSI + Sbjct: 122 DPKEKAKSETRDWLNNVVSELESQIDSFEAELEGLSVKKGKTRPPRLTHLETSITR 177 >ref|XP_002873878.1| transcription regulator NOT2/NOT3/NOT5 family protein [Arabidopsis lyrata subsp. lyrata] gi|297319715|gb|EFH50137.1| transcription regulator NOT2/NOT3/NOT5 family protein [Arabidopsis lyrata subsp. lyrata] Length = 847 Score = 92.0 bits (227), Expect = 4e-17 Identities = 43/56 (76%), Positives = 49/56 (87%) Frame = +1 Query: 70 DPRDKAKSEKRDWLNNVVSELESEVHSFEAEIEGLFVKKGMARPPRLIHLETSIAQ 237 DP++KAKSE RDWLNNVVSELES++ SFEAE+EGL VKKG RPPRL HLETSI + Sbjct: 122 DPKEKAKSETRDWLNNVVSELESQIDSFEAELEGLSVKKGKTRPPRLTHLETSITR 177