BLASTX nr result

ID: Coptis21_contig00027148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027148
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141143.1| PREDICTED: uncharacterized protein LOC101206...    95   7e-18
gb|AAK43900.1|AF370523_1 Unknown protein [Arabidopsis thaliana] ...    92   4e-17
ref|NP_568361.1| CCR4-NOT transcription complex subunit 3 [Arabi...    92   4e-17
dbj|BAB09481.1| unnamed protein product [Arabidopsis thaliana]         92   4e-17
ref|XP_002873878.1| transcription regulator NOT2/NOT3/NOT5 famil...    92   4e-17

>ref|XP_004141143.1| PREDICTED: uncharacterized protein LOC101206210 [Cucumis sativus]
           gi|449509538|ref|XP_004163617.1| PREDICTED:
           uncharacterized LOC101206210 [Cucumis sativus]
          Length = 900

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 44/56 (78%), Positives = 51/56 (91%)
 Frame = +1

Query: 70  DPRDKAKSEKRDWLNNVVSELESEVHSFEAEIEGLFVKKGMARPPRLIHLETSIAQ 237
           DP++KAKSE RDWLNNVVSELES++ +FEAEIEGL VKKG ARPPRL+HLETSI +
Sbjct: 122 DPKEKAKSETRDWLNNVVSELESQIDNFEAEIEGLSVKKGKARPPRLVHLETSITR 177


>gb|AAK43900.1|AF370523_1 Unknown protein [Arabidopsis thaliana] gi|25084156|gb|AAN72188.1|
           Unknown protein [Arabidopsis thaliana]
          Length = 843

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/56 (76%), Positives = 49/56 (87%)
 Frame = +1

Query: 70  DPRDKAKSEKRDWLNNVVSELESEVHSFEAEIEGLFVKKGMARPPRLIHLETSIAQ 237
           DP++KAKSE RDWLNNVVSELES++ SFEAE+EGL VKKG  RPPRL HLETSI +
Sbjct: 122 DPKEKAKSETRDWLNNVVSELESQIDSFEAELEGLSVKKGKTRPPRLTHLETSITR 177


>ref|NP_568361.1| CCR4-NOT transcription complex subunit 3 [Arabidopsis thaliana]
           gi|332005138|gb|AED92521.1| CCR4-NOT transcription
           complex subunit 3 [Arabidopsis thaliana]
          Length = 843

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/56 (76%), Positives = 49/56 (87%)
 Frame = +1

Query: 70  DPRDKAKSEKRDWLNNVVSELESEVHSFEAEIEGLFVKKGMARPPRLIHLETSIAQ 237
           DP++KAKSE RDWLNNVVSELES++ SFEAE+EGL VKKG  RPPRL HLETSI +
Sbjct: 122 DPKEKAKSETRDWLNNVVSELESQIDSFEAELEGLSVKKGKTRPPRLTHLETSITR 177


>dbj|BAB09481.1| unnamed protein product [Arabidopsis thaliana]
          Length = 889

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/56 (76%), Positives = 49/56 (87%)
 Frame = +1

Query: 70  DPRDKAKSEKRDWLNNVVSELESEVHSFEAEIEGLFVKKGMARPPRLIHLETSIAQ 237
           DP++KAKSE RDWLNNVVSELES++ SFEAE+EGL VKKG  RPPRL HLETSI +
Sbjct: 122 DPKEKAKSETRDWLNNVVSELESQIDSFEAELEGLSVKKGKTRPPRLTHLETSITR 177


>ref|XP_002873878.1| transcription regulator NOT2/NOT3/NOT5 family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297319715|gb|EFH50137.1|
           transcription regulator NOT2/NOT3/NOT5 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 847

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/56 (76%), Positives = 49/56 (87%)
 Frame = +1

Query: 70  DPRDKAKSEKRDWLNNVVSELESEVHSFEAEIEGLFVKKGMARPPRLIHLETSIAQ 237
           DP++KAKSE RDWLNNVVSELES++ SFEAE+EGL VKKG  RPPRL HLETSI +
Sbjct: 122 DPKEKAKSETRDWLNNVVSELESQIDSFEAELEGLSVKKGKTRPPRLTHLETSITR 177


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