BLASTX nr result
ID: Coptis21_contig00027141
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00027141
(1174 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 106 2e-24
emb|CBI29360.3| unnamed protein product [Vitis vinifera] 106 2e-24
emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera] 102 2e-22
dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas] 102 3e-22
dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas] 102 3e-22
>ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
[Vitis vinifera]
Length = 1093
Score = 106 bits (265), Expect(2) = 2e-24
Identities = 87/250 (34%), Positives = 123/250 (49%), Gaps = 31/250 (12%)
Frame = +3
Query: 411 ARKAKEKLKCRSIGGKPICIKFSN----LF*TKIANVFIKNLSRRKDDKVVLEHFSEYGR 578
A A E L + GKPI I FS+ + + ANVFIKNL D+K +L+ F+ +G
Sbjct: 527 ATNALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFGT 586
Query: 579 ILSCKVI--DTGTSKNYAYVQFVEVEAAKMAITDMNAVML-----YPCWSFPYQTRERGS 737
+LSCK+ + G SK Y +VQF + EAA+ AI +N +++ Y +Q R RG+
Sbjct: 587 VLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVRHQERNRGN 646
Query: 738 SKI*KSLYYMCRNLSEKVDDVIIWEIYDEYVSATVECVGHERSELC---GFVRFNDPVGA 908
+ Y+ +NLSE D + I+ +Y S T V + S + GFV F A
Sbjct: 647 GSPKFTNVYV-KNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSA 705
Query: 909 EYAAGQVK-KFFYDSKYWTVEWYKSKSEIKAQQHA----------------NLYLKNLDD 1037
A + F D K W V + KSE +A+ A NLYLKNLDD
Sbjct: 706 AAAVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNLDD 765
Query: 1038 SLNE*MMKNL 1067
S+N+ +K L
Sbjct: 766 SVNDEKLKEL 775
Score = 33.5 bits (75), Expect(2) = 2e-24
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2
Query: 1049 INDEELKMLFSEFGKVKVTSCKV 1117
+NDE+LK LFSEFG +TSCKV
Sbjct: 767 VNDEKLKELFSEFG--TITSCKV 787
>emb|CBI29360.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 106 bits (265), Expect(2) = 2e-24
Identities = 87/250 (34%), Positives = 123/250 (49%), Gaps = 31/250 (12%)
Frame = +3
Query: 411 ARKAKEKLKCRSIGGKPICIKFSN----LF*TKIANVFIKNLSRRKDDKVVLEHFSEYGR 578
A A E L + GKPI I FS+ + + ANVFIKNL D+K +L+ F+ +G
Sbjct: 67 ATNALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFGT 126
Query: 579 ILSCKVI--DTGTSKNYAYVQFVEVEAAKMAITDMNAVML-----YPCWSFPYQTRERGS 737
+LSCK+ + G SK Y +VQF + EAA+ AI +N +++ Y +Q R RG+
Sbjct: 127 VLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVRHQERNRGN 186
Query: 738 SKI*KSLYYMCRNLSEKVDDVIIWEIYDEYVSATVECVGHERSELC---GFVRFNDPVGA 908
+ Y+ +NLSE D + I+ +Y S T V + S + GFV F A
Sbjct: 187 GSPKFTNVYV-KNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSA 245
Query: 909 EYAAGQVK-KFFYDSKYWTVEWYKSKSEIKAQQHA----------------NLYLKNLDD 1037
A + F D K W V + KSE +A+ A NLYLKNLDD
Sbjct: 246 AAAVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNLDD 305
Query: 1038 SLNE*MMKNL 1067
S+N+ +K L
Sbjct: 306 SVNDEKLKEL 315
Score = 33.5 bits (75), Expect(2) = 2e-24
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2
Query: 1049 INDEELKMLFSEFGKVKVTSCKV 1117
+NDE+LK LFSEFG +TSCKV
Sbjct: 307 VNDEKLKELFSEFG--TITSCKV 327
>emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]
Length = 632
Score = 102 bits (253), Expect(2) = 2e-22
Identities = 84/244 (34%), Positives = 119/244 (48%), Gaps = 31/244 (12%)
Frame = +3
Query: 411 ARKAKEKLKCRSIGGKPICIKFSN----LF*TKIANVFIKNLSRRKDDKVVLEHFSEYGR 578
A A E L + GKPI I FS+ + + ANVFIKNL D+K +L+ F+ +G
Sbjct: 93 ATNALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFGT 152
Query: 579 ILSCKVI--DTGTSKNYAYVQFVEVEAAKMAITDMNAVML-----YPCWSFPYQTRERGS 737
+LSCK+ + G SK Y +VQF + EAA+ AI +N +++ Y +Q R G+
Sbjct: 153 VLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVRHQERNXGN 212
Query: 738 SKI*KSLYYMCRNLSEKVDDVIIWEIYDEYVSATVECVGHERSELC---GFVRFNDPVGA 908
+ Y+ +NLSE D + I+ +Y S T V + S + GFV F A
Sbjct: 213 GSPKFTNVYV-KNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSA 271
Query: 909 EYAAGQVK-KFFYDSKYWTVEWYKSKSEIKAQQHA----------------NLYLKNLDD 1037
A + F D K W V + KSE +A+ A NLYLKNLDD
Sbjct: 272 AAAVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGXNLYLKNLDD 331
Query: 1038 SLNE 1049
S+N+
Sbjct: 332 SVND 335
Score = 31.2 bits (69), Expect(2) = 2e-22
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 1049 INDEELKMLFSEFGKVKVTSCKV 1117
+NDE+L LFSEFG +TSCKV
Sbjct: 333 VNDEKLXELFSEFG--TITSCKV 353
>dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 102 bits (253), Expect(2) = 3e-22
Identities = 80/248 (32%), Positives = 121/248 (48%), Gaps = 29/248 (11%)
Frame = +3
Query: 411 ARKAKEKLKCRSIGGKPICIKFS----NLF*TKIANVFIKNLSRRKDDKVVLEHFSEYGR 578
A +A E L + GKPI I +S + + N++IKNL + D+K + + FS +G
Sbjct: 83 AAQAIEVLNFTPVNGKPIRIMYSYRDPTIRKSGTGNIYIKNLDKAIDNKALHDTFSAFGS 142
Query: 579 ILSCKVI--DTGTSKNYAYVQFVEVEAAKMAITDMNAVML--YPCWSFPYQTRERGSSKI 746
ILSCKV G S Y +VQF E+AK AI +N ++L + P+ ++ S I
Sbjct: 143 ILSCKVATDSLGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQVYVGPFLRKQERESAI 202
Query: 747 *KSLY--YMCRNLSEKVDDVIIWEIYDEY---VSATVECVGHERSELCGFVRFNDPVGAE 911
K+ + +NLSE + + +I+ EY SA V G+ +S GFV F +P A
Sbjct: 203 DKATFNNVYVKNLSETTTEEDLKKIFGEYGTITSAVVMRDGNGKSRCFGFVNFENPDDAA 262
Query: 912 YAAGQVKKFFYDSKYWTVEWYKSKSEIKAQ----------------QHANLYLKNLDDSL 1043
+ + +D K W V + KSE + + Q NLY+KNLDDS+
Sbjct: 263 QSVEALNGKTFDEKEWYVGKAQKKSEREVELKGRFEQTLKETVDKFQGLNLYVKNLDDSI 322
Query: 1044 NE*MMKNL 1067
+ +K L
Sbjct: 323 TDDKLKEL 330
Score = 30.4 bits (67), Expect(2) = 3e-22
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 1049 INDEELKMLFSEFGKVKVTSCKV 1117
I D++LK LFSEFG +TSCKV
Sbjct: 322 ITDDKLKELFSEFG--TITSCKV 342
>dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 102 bits (253), Expect(2) = 3e-22
Identities = 84/249 (33%), Positives = 121/249 (48%), Gaps = 30/249 (12%)
Frame = +3
Query: 411 ARKAKEKLKCRSIGGKPICIKFS----NLF*TKIANVFIKNLSRRKDDKVVLEHFSEYGR 578
A +A E L + GKPI I +S + + N++IKNL + D+K + + FS +G
Sbjct: 83 AAQALEVLNFTPVNGKPIRIMYSYRDPTIRKSGAGNIYIKNLDKAIDNKALHDTFSAFGN 142
Query: 579 ILSCKVI--DTGTSKNYAYVQFVEVEAAKMAITDMNAVML-----YPCWSFPYQTRERGS 737
ILSCKV G S Y +VQF E+AK AI +N ++L Y Q RE G+
Sbjct: 143 ILSCKVATDSAGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQVYVGPFLRRQERESGT 202
Query: 738 SKI*KSLYYMCRNLSEKVDDVIIWEIYDEY---VSATVECVGHERSELCGFVRFNDPVGA 908
K + Y+ +NLSE + + +I+ EY SA V G +S GFV F +P A
Sbjct: 203 DKTKFNNVYV-KNLSETTTEEDLKKIFGEYGAITSAVVMRDGDGKSRCFGFVNFENPDDA 261
Query: 909 EYAAGQVKKFFYDSKYWTVEWYKSKS----EIKAQ------------QHANLYLKNLDDS 1040
+ + +D K W V + KS E+K Q + NLY+KNLDDS
Sbjct: 262 ARSVEALNGKTFDEKEWYVGKAQKKSEREVELKGQFEQTLKETVDKFEGLNLYVKNLDDS 321
Query: 1041 LNE*MMKNL 1067
+ + +K L
Sbjct: 322 ITDDKLKEL 330
Score = 30.4 bits (67), Expect(2) = 3e-22
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 1049 INDEELKMLFSEFGKVKVTSCKV 1117
I D++LK LFSEFG +TSCKV
Sbjct: 322 ITDDKLKELFSEFG--TITSCKV 342