BLASTX nr result

ID: Coptis21_contig00027136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027136
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510979.1| DNA binding protein, putative [Ricinus commu...   166   3e-39
ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256...   165   6e-39
ref|XP_002303490.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
emb|CBI27823.3| unnamed protein product [Vitis vinifera]              160   2e-37
ref|XP_002516293.1| DNA binding protein, putative [Ricinus commu...   154   1e-35

>ref|XP_002510979.1| DNA binding protein, putative [Ricinus communis]
           gi|223550094|gb|EEF51581.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 328

 Score =  166 bits (420), Expect = 3e-39
 Identities = 83/139 (59%), Positives = 103/139 (74%)
 Frame = -1

Query: 601 DESYVNPAEELGLMDGGAEERILFLQLPASLPFVKRSASAEGNEMANNSKASKAAGRSEK 422
           DES +NPA +L L++    E+++F QLPA LP VKRSASA+G E A  S  S+    ++K
Sbjct: 186 DESTMNPASDLELLEECDTEKMIFFQLPAKLPLVKRSASAKGKEKAEGSIPSQGKNAAKK 245

Query: 421 GCTLEELPPGLMGKLLVYKSGAVKLKLGDHLYDVSPGSDCIFSQDVIAVNTEEKHCCVVG 242
             +L+ L  G MGK+LVY+SGAVKLKLGD LYDVS GSDC+F+QDV+A+NT  KHCC +G
Sbjct: 246 ESSLDGLSAGYMGKMLVYRSGAVKLKLGDTLYDVSQGSDCMFAQDVMAINTAAKHCCTIG 305

Query: 241 ELNKHAVVTPDFDSLLGGV 185
           EL K AVVTPD DSLL  V
Sbjct: 306 ELEKRAVVTPDVDSLLDSV 324


>ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256088 [Vitis vinifera]
          Length = 289

 Score =  165 bits (417), Expect = 6e-39
 Identities = 83/139 (59%), Positives = 100/139 (71%)
 Frame = -1

Query: 601 DESYVNPAEELGLMDGGAEERILFLQLPASLPFVKRSASAEGNEMANNSKASKAAGRSEK 422
           DE+  NPA ELGLMD   E  +LFLQLPA++P +K++A+AE  E               K
Sbjct: 161 DENSTNPAMELGLMDENQEASMLFLQLPATMPMIKQAATAEVKE--------------NK 206

Query: 421 GCTLEELPPGLMGKLLVYKSGAVKLKLGDHLYDVSPGSDCIFSQDVIAVNTEEKHCCVVG 242
            C LEELP G MGK+LVYKSGA+KLKLGD LYDVSPG DC+F+QDV+A+NTE+K CCV+G
Sbjct: 207 TCRLEELPSGFMGKMLVYKSGAIKLKLGDTLYDVSPGLDCVFAQDVVAINTEDKCCCVLG 266

Query: 241 ELNKHAVVTPDFDSLLGGV 185
           EL K AVVTPD DS L  +
Sbjct: 267 ELKKRAVVTPDVDSALSSM 285


>ref|XP_002303490.1| predicted protein [Populus trichocarpa] gi|222840922|gb|EEE78469.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  160 bits (406), Expect = 1e-37
 Identities = 79/139 (56%), Positives = 102/139 (73%)
 Frame = -1

Query: 601 DESYVNPAEELGLMDGGAEERILFLQLPASLPFVKRSASAEGNEMANNSKASKAAGRSEK 422
           DE+ +NPA +LGL++    ER+ F Q+P  LPF+KRSASA+G E A+ S  S++   + K
Sbjct: 184 DETTINPASDLGLLEECDNERLFFFQVPEKLPFLKRSASAKGKERADMSMPSESKSAARK 243

Query: 421 GCTLEELPPGLMGKLLVYKSGAVKLKLGDHLYDVSPGSDCIFSQDVIAVNTEEKHCCVVG 242
             + EELP G MGK+LVY+SGA+KLKLGD LYDVSPGS+C F+QDV+A+NT  K CC +G
Sbjct: 244 -TSFEELPKGYMGKMLVYRSGAIKLKLGDALYDVSPGSECTFAQDVMAINTAGKDCCAIG 302

Query: 241 ELNKHAVVTPDFDSLLGGV 185
           EL K AVVTPD +  L  V
Sbjct: 303 ELGKRAVVTPDIEFNLNSV 321


>emb|CBI27823.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  160 bits (405), Expect = 2e-37
 Identities = 81/139 (58%), Positives = 98/139 (70%)
 Frame = -1

Query: 601 DESYVNPAEELGLMDGGAEERILFLQLPASLPFVKRSASAEGNEMANNSKASKAAGRSEK 422
           DE+  NPA ELGLMD   E  +LFLQLPA++P +K++A+AE                   
Sbjct: 171 DENSTNPAMELGLMDENQEASMLFLQLPATMPMIKQAATAET------------------ 212

Query: 421 GCTLEELPPGLMGKLLVYKSGAVKLKLGDHLYDVSPGSDCIFSQDVIAVNTEEKHCCVVG 242
            C LEELP G MGK+LVYKSGA+KLKLGD LYDVSPG DC+F+QDV+A+NTE+K CCV+G
Sbjct: 213 -CRLEELPSGFMGKMLVYKSGAIKLKLGDTLYDVSPGLDCVFAQDVVAINTEDKCCCVLG 271

Query: 241 ELNKHAVVTPDFDSLLGGV 185
           EL K AVVTPD DS L  +
Sbjct: 272 ELKKRAVVTPDVDSALSSM 290


>ref|XP_002516293.1| DNA binding protein, putative [Ricinus communis]
           gi|223544779|gb|EEF46295.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 286

 Score =  154 bits (388), Expect = 1e-35
 Identities = 74/140 (52%), Positives = 100/140 (71%)
 Frame = -1

Query: 601 DESYVNPAEELGLMDGGAEERILFLQLPASLPFVKRSASAEGNEMANNSKASKAAGRSEK 422
           DE+  N A  LGLM+   E  + FLQLP ++P +KR A+A+G+++           + EK
Sbjct: 156 DENSTNSAINLGLMEENVEANMFFLQLPPTVPMIKRLATADGHKV-----------KEEK 204

Query: 421 GCTLEELPPGLMGKLLVYKSGAVKLKLGDHLYDVSPGSDCIFSQDVIAVNTEEKHCCVVG 242
            C L+ELP G MGK+LVY+SGAVKLKLGD LYDVSPG D  F+QD+ A+NT EKHCCVV 
Sbjct: 205 TCKLDELPAGHMGKMLVYRSGAVKLKLGDTLYDVSPGLDFAFAQDIAAINTAEKHCCVVA 264

Query: 241 ELNKHAVVTPDFDSLLGGVS 182
           E++KHA+VTPD D+++  ++
Sbjct: 265 EIDKHAIVTPDVDAIINSMA 284


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