BLASTX nr result

ID: Coptis21_contig00027132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027132
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK28618.1| unknown [Arabidopsis thaliana]                         196   2e-48
ref|NP_192210.1| leucine-rich repeat family protein [Arabidopsis...   196   2e-48
ref|XP_003591587.1| Receptor-like protein kinase [Medicago trunc...   193   1e-47
ref|XP_002874882.1| leucine-rich repeat family protein [Arabidop...   189   3e-46
ref|XP_002524773.1| serine-threonine protein kinase, plant-type,...   187   6e-46

>gb|ABK28618.1| unknown [Arabidopsis thaliana]
          Length = 396

 Score =  196 bits (497), Expect = 2e-48
 Identities = 103/159 (64%), Positives = 117/159 (73%)
 Frame = +3

Query: 3   RLHPALGKLSSLAEFSIVPGRIMGSLPQTLSQLKNLRFLAISKNFISGPIPFSLSELTSL 182
           R+ PA+GKLS+L E SIVPGRIMGSLP T+SQ KNLRFLAIS+NFISG IP SLSEL  L
Sbjct: 88  RIDPAIGKLSALTELSIVPGRIMGSLPHTISQSKNLRFLAISRNFISGEIPASLSELRGL 147

Query: 183 RTLDLSYNQITGSIPSSFGSLRSLTNLILCHNHLSGSLPSFFSQSLTRLDLKHNNXXXXX 362
           +TLDLSYNQ+TGSIP S GSL  L+NLILCHNHL+GS+P F SQSLTR+DLK NN     
Sbjct: 148 KTLDLSYNQLTGSIPPSIGSLPELSNLILCHNHLNGSIPQFLSQSLTRIDLKRNNLTGII 207

Query: 363 XXXXXXXXXXXXXXXXNKFTGSVTRVLGQLTQLSYLDLS 479
                           N+ TG V RVL +L QL+YLDLS
Sbjct: 208 SLTSLPPSLQYLSLAWNQLTGPVYRVLLRLNQLNYLDLS 246


>ref|NP_192210.1| leucine-rich repeat family protein [Arabidopsis thaliana]
           gi|3924604|gb|AAC79105.1| putative leucine-rich repeat
           protein [Arabidopsis thaliana]
           gi|7269786|emb|CAB77786.1| putative leucine-rich repeat
           protein [Arabidopsis thaliana]
           gi|91806626|gb|ABE66040.1| leucine-rich repeat family
           protein [Arabidopsis thaliana]
           gi|332656860|gb|AEE82260.1| leucine-rich repeat family
           protein [Arabidopsis thaliana]
          Length = 395

 Score =  196 bits (497), Expect = 2e-48
 Identities = 103/159 (64%), Positives = 117/159 (73%)
 Frame = +3

Query: 3   RLHPALGKLSSLAEFSIVPGRIMGSLPQTLSQLKNLRFLAISKNFISGPIPFSLSELTSL 182
           R+ PA+GKLS+L E SIVPGRIMGSLP T+SQ KNLRFLAIS+NFISG IP SLSEL  L
Sbjct: 88  RIDPAIGKLSALTELSIVPGRIMGSLPHTISQSKNLRFLAISRNFISGEIPASLSELRGL 147

Query: 183 RTLDLSYNQITGSIPSSFGSLRSLTNLILCHNHLSGSLPSFFSQSLTRLDLKHNNXXXXX 362
           +TLDLSYNQ+TGSIP S GSL  L+NLILCHNHL+GS+P F SQSLTR+DLK NN     
Sbjct: 148 KTLDLSYNQLTGSIPPSIGSLPELSNLILCHNHLNGSIPQFLSQSLTRIDLKRNNLTGII 207

Query: 363 XXXXXXXXXXXXXXXXNKFTGSVTRVLGQLTQLSYLDLS 479
                           N+ TG V RVL +L QL+YLDLS
Sbjct: 208 SLTSLPPSLQYLSLAWNQLTGPVYRVLLRLNQLNYLDLS 246


>ref|XP_003591587.1| Receptor-like protein kinase [Medicago truncatula]
           gi|357442627|ref|XP_003591591.1| Receptor-like protein
           kinase [Medicago truncatula] gi|355480635|gb|AES61838.1|
           Receptor-like protein kinase [Medicago truncatula]
           gi|355480639|gb|AES61842.1| Receptor-like protein kinase
           [Medicago truncatula]
          Length = 399

 Score =  193 bits (490), Expect = 1e-47
 Identities = 100/159 (62%), Positives = 117/159 (73%)
 Frame = +3

Query: 3   RLHPALGKLSSLAEFSIVPGRIMGSLPQTLSQLKNLRFLAISKNFISGPIPFSLSELTSL 182
           RL PA+GKLSSLAEF++VPGRI G LPQT+S LKNLRFL +++NFISG IP  L EL SL
Sbjct: 92  RLDPAIGKLSSLAEFTVVPGRIYGPLPQTISSLKNLRFLGVNRNFISGEIPAELGELRSL 151

Query: 183 RTLDLSYNQITGSIPSSFGSLRSLTNLILCHNHLSGSLPSFFSQSLTRLDLKHNNXXXXX 362
           RT+DLSYNQ+TG IP + GSL  LTNLILCHN L+GSLP F SQSL+RLDLKHN+     
Sbjct: 152 RTIDLSYNQLTGKIPPTVGSLPGLTNLILCHNRLTGSLPRFDSQSLSRLDLKHNSLTGSI 211

Query: 363 XXXXXXXXXXXXXXXXNKFTGSVTRVLGQLTQLSYLDLS 479
                           N+FTGS+ RVL +L QL+YLDLS
Sbjct: 212 GPNFLPASLQYLSLSWNQFTGSMDRVLTRLNQLNYLDLS 250


>ref|XP_002874882.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297320719|gb|EFH51141.1| leucine-rich repeat
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 395

 Score =  189 bits (479), Expect = 3e-46
 Identities = 99/159 (62%), Positives = 113/159 (71%)
 Frame = +3

Query: 3   RLHPALGKLSSLAEFSIVPGRIMGSLPQTLSQLKNLRFLAISKNFISGPIPFSLSELTSL 182
           R+ PA+GKLS+L E SIVPGRIMGSLP T+SQ KNLRFLAIS+NF+SG IP SL EL  L
Sbjct: 88  RIDPAIGKLSALTELSIVPGRIMGSLPHTISQSKNLRFLAISRNFLSGEIPASLGELRRL 147

Query: 183 RTLDLSYNQITGSIPSSFGSLRSLTNLILCHNHLSGSLPSFFSQSLTRLDLKHNNXXXXX 362
           +TLDLSYNQ+TGSIP   G L  L+NLILCHNHL+GS+P F SQSLTR+DLK NN     
Sbjct: 148 KTLDLSYNQLTGSIPPPIGYLPELSNLILCHNHLNGSIPQFLSQSLTRIDLKRNNLTGII 207

Query: 363 XXXXXXXXXXXXXXXXNKFTGSVTRVLGQLTQLSYLDLS 479
                           N  TG V RVL +L QL+YLDLS
Sbjct: 208 SPTSLPPSLQYLSLAWNHLTGPVNRVLLRLNQLNYLDLS 246


>ref|XP_002524773.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223535957|gb|EEF37616.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 400

 Score =  187 bits (476), Expect = 6e-46
 Identities = 95/159 (59%), Positives = 119/159 (74%)
 Frame = +3

Query: 3   RLHPALGKLSSLAEFSIVPGRIMGSLPQTLSQLKNLRFLAISKNFISGPIPFSLSELTSL 182
           RL PA+GKLS+LAE SIVPGRI+GSLPQ+LSQLK LRFLA+S+NF+SG IP SL +L +L
Sbjct: 93  RLDPAIGKLSALAELSIVPGRIIGSLPQSLSQLKGLRFLAVSRNFLSGEIPASLGQLRNL 152

Query: 183 RTLDLSYNQITGSIPSSFGSLRSLTNLILCHNHLSGSLPSFFSQSLTRLDLKHNNXXXXX 362
           +TLDLSYNQ+TG IP S G++  L+N+ILCHN LSGS+P+F SQ+LTRLDLKHN+     
Sbjct: 153 KTLDLSYNQLTGPIPHSIGTIPQLSNVILCHNRLSGSVPAFLSQTLTRLDLKHNDLSGSL 212

Query: 363 XXXXXXXXXXXXXXXXNKFTGSVTRVLGQLTQLSYLDLS 479
                           N+ +G V R+L +L QL+YLDLS
Sbjct: 213 SPYALPPSVQYLSLAWNRLSGPVDRLLNRLNQLNYLDLS 251


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