BLASTX nr result

ID: Coptis21_contig00027120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027120
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 i...   128   4e-28
ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 i...   128   4e-28
ref|XP_003538462.1| PREDICTED: putative ABC1 protein At2g40090-l...   119   3e-25
ref|XP_004166850.1| PREDICTED: putative ABC1 protein At2g40090-l...   116   2e-24
ref|XP_002311218.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24

>ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 isoform 2 [Vitis
           vinifera]
          Length = 549

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/93 (66%), Positives = 75/93 (80%)
 Frame = -1

Query: 281 TRLLWRSGRKLGLLATSLGIGAAVGTIATSDDPQTSLKIFTNVPLRLVRDSLTAATIAFD 102
           TRLLWR+  KL ++AT+ G GAA   IA+SDDPQ +LK+ T VP RL+RDS+TAATIAFD
Sbjct: 3   TRLLWRARAKLAVVATAFGGGAAAAAIASSDDPQRALKVCTTVPTRLIRDSITAATIAFD 62

Query: 101 YEYSLWGLVEGSAEREKVKRQVHTRCATRLQEL 3
           YEYSL+GL+EGS ER + K +VH RCA RLQEL
Sbjct: 63  YEYSLFGLLEGSPERSRAKHEVHVRCARRLQEL 95


>ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 isoform 1 [Vitis
           vinifera] gi|297736618|emb|CBI25489.3| unnamed protein
           product [Vitis vinifera]
          Length = 538

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/93 (66%), Positives = 75/93 (80%)
 Frame = -1

Query: 281 TRLLWRSGRKLGLLATSLGIGAAVGTIATSDDPQTSLKIFTNVPLRLVRDSLTAATIAFD 102
           TRLLWR+  KL ++AT+ G GAA   IA+SDDPQ +LK+ T VP RL+RDS+TAATIAFD
Sbjct: 3   TRLLWRARAKLAVVATAFGGGAAAAAIASSDDPQRALKVCTTVPTRLIRDSITAATIAFD 62

Query: 101 YEYSLWGLVEGSAEREKVKRQVHTRCATRLQEL 3
           YEYSL+GL+EGS ER + K +VH RCA RLQEL
Sbjct: 63  YEYSLFGLLEGSPERSRAKHEVHVRCARRLQEL 95


>ref|XP_003538462.1| PREDICTED: putative ABC1 protein At2g40090-like [Glycine max]
          Length = 541

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/90 (62%), Positives = 72/90 (80%)
 Frame = -1

Query: 272 LWRSGRKLGLLATSLGIGAAVGTIATSDDPQTSLKIFTNVPLRLVRDSLTAATIAFDYEY 93
           LWR+G KL L+A+++G GA    IATSDDP+T+LK+   VP RL RD+ TAA IAFDYEY
Sbjct: 4   LWRAGAKLSLVASAVGGGATAALIATSDDPETALKLCATVPHRLFRDAATAANIAFDYEY 63

Query: 92  SLWGLVEGSAEREKVKRQVHTRCATRLQEL 3
           SLWGL+EGS+ERE++K +VH R A +LQ+L
Sbjct: 64  SLWGLLEGSSERERIKHEVHLRSAQKLQDL 93


>ref|XP_004166850.1| PREDICTED: putative ABC1 protein At2g40090-like [Cucumis sativus]
          Length = 538

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/92 (63%), Positives = 70/92 (76%)
 Frame = -1

Query: 278 RLLWRSGRKLGLLATSLGIGAAVGTIATSDDPQTSLKIFTNVPLRLVRDSLTAATIAFDY 99
           R LWR+G K+ + AT++G GAA  +IATSDDP  +LK+ T VPLRL+R S T ATIA DY
Sbjct: 4   RSLWRAGAKVAMAATAIGGGAAAASIATSDDPSMALKLCTTVPLRLLRLSFTVATIAVDY 63

Query: 98  EYSLWGLVEGSAEREKVKRQVHTRCATRLQEL 3
           EYSLW   EGS+EREKVK +VH R A R+QEL
Sbjct: 64  EYSLWRSPEGSSEREKVKHEVHLRSARRIQEL 95


>ref|XP_002311218.1| predicted protein [Populus trichocarpa] gi|222851038|gb|EEE88585.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/93 (61%), Positives = 72/93 (77%)
 Frame = -1

Query: 281 TRLLWRSGRKLGLLATSLGIGAAVGTIATSDDPQTSLKIFTNVPLRLVRDSLTAATIAFD 102
           TR LWR+  KL + AT+L  G A  T+ATS+DP T+LK+ T VP+RL R+++TAA+IAFD
Sbjct: 3   TRSLWRTRGKLAVAATALLTGGATATVATSEDPATALKLCTAVPVRLYRNTVTAASIAFD 62

Query: 101 YEYSLWGLVEGSAEREKVKRQVHTRCATRLQEL 3
           YEYSLWGL EGS E+ KVK +VH R A +LQEL
Sbjct: 63  YEYSLWGLSEGSVEKAKVKHEVHLRSARKLQEL 95


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