BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027112
         (914 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531104.1| DNA repair and recombination protein radB, p...   261   2e-67
emb|CBI16200.3| unnamed protein product [Vitis vinifera]              248   1e-63
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]   238   1e-60
ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog ...   236   4e-60
ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog ...   231   2e-58

>ref|XP_002531104.1| DNA repair and recombination protein radB, putative [Ricinus
           communis] gi|223529300|gb|EEF31269.1| DNA repair and
           recombination protein radB, putative [Ricinus communis]
          Length = 315

 Score =  261 bits (666), Expect = 2e-67
 Identities = 127/209 (60%), Positives = 163/209 (77%)
 Frame = -1

Query: 914 VGRSSSGKTQVCLQTASSVACKYADSVVFLDTCNSFTSRRVACFVDRLLNLPFNQATKNG 735
           VG SSSGKTQVCLQ A++VA ++   V+F+DT NSF+ RR+  FV R+     NQ     
Sbjct: 114 VGSSSSGKTQVCLQVAANVAKQHMGRVIFVDTGNSFSPRRIEQFVGRISGSALNQTV--- 170

Query: 734 VERAMNNIVCHSVFDIFGLLDVLNQLEFTLRSQGKTGDGKLRLLVIDSISSVITPVLGGG 555
               M+NI+CHSVFDIF + DVL+QLE +LRSQG +GD K++ L++DSISS+ITP+LGGG
Sbjct: 171 ----MSNILCHSVFDIFSMFDVLHQLEISLRSQGHSGDFKVQSLIVDSISSLITPILGGG 226

Query: 554 GAHGHCLMVSTGFLLKKLAHEHSLCVLVTNHMVSGEGGSSKPALGESWKNVSHARILLSH 375
           G+ GH LM S G LLKKLAHEH++ VLVTNHMV+GEGG+ KPALGESWK++ H R+LLS 
Sbjct: 227 GSQGHALMTSAGILLKKLAHEHNIAVLVTNHMVAGEGGNFKPALGESWKSIPHVRLLLSR 286

Query: 374 DQESNLCNVSILKHPCMASGRSAKFSILD 288
           DQ  N+CNV+ILKHP  ASG++A+F++ D
Sbjct: 287 DQGKNVCNVTILKHPSQASGKAARFTVDD 315


>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score =  248 bits (633), Expect = 1e-63
 Identities = 118/202 (58%), Positives = 159/202 (78%)
 Frame = -1

Query: 914 VGRSSSGKTQVCLQTASSVACKYADSVVFLDTCNSFTSRRVACFVDRLLNLPFNQATKNG 735
           VG SS+GKTQ+CL+ AS VA +Y   VVF+DT NSF+  R+A F++++ +  F +  +N 
Sbjct: 165 VGPSSAGKTQICLKVASGVATRYMGGVVFIDTGNSFSPLRIAHFINQIPDTIFKEVKQNI 224

Query: 734 VERAMNNIVCHSVFDIFGLLDVLNQLEFTLRSQGKTGDGKLRLLVIDSISSVITPVLGGG 555
           +E+ M+ I+CHSVFDIF +LDV++QLE++LRSQ +TG  ++RLL++DSISS+ITP+LGG 
Sbjct: 225 LEKVMSQILCHSVFDIFAMLDVVHQLEYSLRSQVQTGADQVRLLIVDSISSLITPILGGS 284

Query: 554 GAHGHCLMVSTGFLLKKLAHEHSLCVLVTNHMVSGEGGSSKPALGESWKNVSHARILLSH 375
           G+HG  LM+S GFLLKKLAHEH+L V+VTNHMV GEGG  KPALGESWK++ H R+LLS 
Sbjct: 285 GSHGRALMISAGFLLKKLAHEHNLAVVVTNHMVGGEGGILKPALGESWKSIPHVRLLLSR 344

Query: 374 DQESNLCNVSILKHPCMASGRS 309
           D  S++C++SILKH  M    S
Sbjct: 345 DPGSSICHMSILKHSYMVCSLS 366


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score =  238 bits (607), Expect = 1e-60
 Identities = 118/226 (52%), Positives = 163/226 (72%), Gaps = 19/226 (8%)
 Frame = -1

Query: 914 VGRSSSGKTQVCLQTASSVACKYADSVVFLDTCNSFTSRRVACFVDRLLNLPFNQATKNG 735
           VG SSSGKTQ+CL+ AS VA +Y   VVF+DT NSF+  R+A F++++ +  F +  +N 
Sbjct: 113 VGPSSSGKTQICLKVASGVATRYMGGVVFIDTGNSFSPLRIAHFINQIPDTIFKEVKQNI 172

Query: 734 VERAMNNIVCHSVFDIFGLLDVLNQLEFTLRSQGKTGDGKLRLLVIDSISSVITPVLGGG 555
           +E+ M+ I+CHSVFDIF +LDV++QLE++LRSQ +TG  ++RLL++DSISS+ITP+LGG 
Sbjct: 173 LEKVMSQILCHSVFDIFAMLDVVHQLEYSLRSQVQTGADQVRLLIVDSISSLITPILGGS 232

Query: 554 GAHGHCLMVSTGFLLKKLAHEHSLCVL-------------------VTNHMVSGEGGSSK 432
           G+HG  LM+S GFLLKKLAHEH+L V+                   VTNHMV GEGG  K
Sbjct: 233 GSHGRALMISAGFLLKKLAHEHNLAVVPIIKVSILTIITIMIHWLKVTNHMVGGEGGILK 292

Query: 431 PALGESWKNVSHARILLSHDQESNLCNVSILKHPCMASGRSAKFSI 294
           PALGESWK++ H R+LLS D  S++C++SILKH  M+  ++   ++
Sbjct: 293 PALGESWKSIPHVRLLLSRDPGSSICHMSILKHSYMSRTKAINHTL 338


>ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog 4-like [Vitis vinifera]
          Length = 326

 Score =  236 bits (603), Expect = 4e-60
 Identities = 115/197 (58%), Positives = 153/197 (77%)
 Frame = -1

Query: 914 VGRSSSGKTQVCLQTASSVACKYADSVVFLDTCNSFTSRRVACFVDRLLNLPFNQATKNG 735
           VG SS+GKTQ+CL+ AS VA +Y   VVF+DT NSF+  R+A F++++ +  F +     
Sbjct: 113 VGPSSAGKTQICLKVASGVATRYMGGVVFIDTGNSFSPLRIAHFINQIPDTIFKEVI--- 169

Query: 734 VERAMNNIVCHSVFDIFGLLDVLNQLEFTLRSQGKTGDGKLRLLVIDSISSVITPVLGGG 555
               M+ I+CHSVFDIF +LDV++QLE++LRSQ +TG  ++RLL++DSISS+ITP+LGG 
Sbjct: 170 ----MSQILCHSVFDIFAMLDVVHQLEYSLRSQVQTGADQVRLLIVDSISSLITPILGGS 225

Query: 554 GAHGHCLMVSTGFLLKKLAHEHSLCVLVTNHMVSGEGGSSKPALGESWKNVSHARILLSH 375
           G+HG  LM+S GFLLKKLAHEH+L V+VTNHMV GEGG  KPALGESWK++ H R+LLS 
Sbjct: 226 GSHGRALMISAGFLLKKLAHEHNLAVVVTNHMVGGEGGILKPALGESWKSIPHVRLLLSR 285

Query: 374 DQESNLCNVSILKHPCM 324
           D  S++C++SILKH  M
Sbjct: 286 DPGSSICHMSILKHSYM 302


>ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Cucumis
           sativus] gi|449518921|ref|XP_004166484.1| PREDICTED: DNA
           repair protein RAD51 homolog 4-like [Cucumis sativus]
          Length = 314

 Score =  231 bits (588), Expect = 2e-58
 Identities = 118/209 (56%), Positives = 153/209 (73%)
 Frame = -1

Query: 914 VGRSSSGKTQVCLQTASSVACKYADSVVFLDTCNSFTSRRVACFVDRLLNLPFNQATKNG 735
           VG SSSGKTQVCL+ AS+VA  Y   V ++DT NSF+ +R++ FV          + ++ 
Sbjct: 114 VGPSSSGKTQVCLRAASNVAKNYKAEVFYMDTGNSFSPQRISGFVCT--------SEQSM 165

Query: 734 VERAMNNIVCHSVFDIFGLLDVLNQLEFTLRSQGKTGDGKLRLLVIDSISSVITPVLGGG 555
           ++R M +I CHSVF+IF L DVL+QLEF LRSQ   GD +++LL+IDSISS+ITP+LGG 
Sbjct: 166 LQRVMTSISCHSVFNIFALFDVLHQLEFNLRSQTCKGDRRVQLLIIDSISSLITPILGGS 225

Query: 554 GAHGHCLMVSTGFLLKKLAHEHSLCVLVTNHMVSGEGGSSKPALGESWKNVSHARILLSH 375
            + GH LM+S G LLKK+AHEH++ VLVTNH V G+ G+SKPALGESWK+V H R+ LS 
Sbjct: 226 SSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSR 285

Query: 374 DQESNLCNVSILKHPCMASGRSAKFSILD 288
           D  SN+C  SILKH  MASG +A+F I +
Sbjct: 286 DAGSNVCQASILKHSSMASGMTARFVIYE 314