BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027103
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272275.1| PREDICTED: DNA repair protein XRCC2 homolog ...   214   8e-54
emb|CBI21655.3| unnamed protein product [Vitis vinifera]              205   4e-51
ref|XP_002864907.1| predicted protein [Arabidopsis lyrata subsp....   202   3e-50
ref|NP_201257.2| DNA repair protein XRCC2-like protein [Arabidop...   200   2e-49
dbj|BAB11419.1| unnamed protein product [Arabidopsis thaliana]        200   2e-49

>ref|XP_002272275.1| PREDICTED: DNA repair protein XRCC2 homolog [Vitis vinifera]
          Length = 315

 Score =  214 bits (545), Expect = 8e-54
 Identities = 110/194 (56%), Positives = 133/194 (68%), Gaps = 4/194 (2%)
 Frame = +1

Query: 7   RSWIKGDETAKEMXXXXXXXXXXXXXXXXXXXXXXXGNVVEILGPSPSAKTQVLIQAAIN 186
           R WI  DE+AKEM                       GNVVEI GPSPSAKTQ+LIQAA+ 
Sbjct: 4   RGWICTDESAKEMLSRVSAERSLMLLPPLHRVPLRLGNVVEIAGPSPSAKTQILIQAAVY 63

Query: 187 CILPKEWKGVYFGGLERLVMYIDLDCRFDIQRLSDSLKHHINEANEVRNEDLLKRLKRNY 366
           CILPKEW+GV++GGLE LVM+IDLDCRFDI  LS SLKH + E +   N+   ++    +
Sbjct: 64  CILPKEWRGVHYGGLEHLVMFIDLDCRFDILCLSQSLKHRLMETSGSGNKVNWEQNDDPW 123

Query: 367 TTSTSV----FDEELYLSCMRRFLYVRCYNSLEFLATLKTLRFRLEKEREAHGVGVHLLM 534
            + T      +DEEL+ +CMRRFLY+RCY+S EFLATLKTLR+RL++ RE HGV  H LM
Sbjct: 124 GSGTEEPNIGYDEELFAACMRRFLYIRCYDSFEFLATLKTLRYRLQRARETHGVTAHFLM 183

Query: 535 IDSISAFYWMDRAS 576
           IDSI AFYW+DRAS
Sbjct: 184 IDSIGAFYWVDRAS 197


>emb|CBI21655.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score =  205 bits (522), Expect = 4e-51
 Identities = 101/158 (63%), Positives = 123/158 (77%), Gaps = 4/158 (2%)
 Frame = +1

Query: 115 GNVVEILGPSPSAKTQVLIQAAINCILPKEWKGVYFGGLERLVMYIDLDCRFDIQRLSDS 294
           GNVVEI GPSPSAKTQ+LIQAA+ CILPKEW+GV++GGLE LVM+IDLDCRFDI  LS S
Sbjct: 25  GNVVEIAGPSPSAKTQILIQAAVYCILPKEWRGVHYGGLEHLVMFIDLDCRFDILCLSQS 84

Query: 295 LKHHINEANEVRNEDLLKRLKRNYTTSTSV----FDEELYLSCMRRFLYVRCYNSLEFLA 462
           LKH + E +   N+   ++    + + T      +DEEL+ +CMRRFLY+RCY+S EFLA
Sbjct: 85  LKHRLMETSGSGNKVNWEQNDDPWGSGTEEPNIGYDEELFAACMRRFLYIRCYDSFEFLA 144

Query: 463 TLKTLRFRLEKEREAHGVGVHLLMIDSISAFYWMDRAS 576
           TLKTLR+RL++ RE HGV  H LMIDSI AFYW+DRAS
Sbjct: 145 TLKTLRYRLQRARETHGVTAHFLMIDSIGAFYWVDRAS 182


>ref|XP_002864907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310742|gb|EFH41166.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 389

 Score =  202 bits (515), Expect = 3e-50
 Identities = 106/199 (53%), Positives = 134/199 (67%), Gaps = 7/199 (3%)
 Frame = +1

Query: 1   EVRSWIKGDETAKEMXXXXXXXXXXXXXXXXXXXXXXXGNVVEILGPSPSAKTQVLIQAA 180
           E RSWI GDETAK+M                       GNVVEI G SPSAKTQ+LIQAA
Sbjct: 5   EARSWICGDETAKQMLSRVLKDRAFMLLPPLHRVPLRAGNVVEITGASPSAKTQILIQAA 64

Query: 181 INCILPKEWKGVYFGGLERLVMYIDLDCRFDIQRLSDSLKHHINEANEVRN-------ED 339
           I+CILPK W G+++GGL +LV+++DLDCRFD+ RLS  LKH + +AN + N       E 
Sbjct: 65  ISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANRLGNGAWWQLEES 124

Query: 340 LLKRLKRNYTTSTSVFDEELYLSCMRRFLYVRCYNSLEFLATLKTLRFRLEKEREAHGVG 519
            +K  K       +VFDEELY+SCM+RFLYVRCY+SLE L++LKTL +R+ +++EA G  
Sbjct: 125 NVKSCKSAQEKPKTVFDEELYVSCMKRFLYVRCYDSLELLSSLKTLHYRI-RQQEACGSQ 183

Query: 520 VHLLMIDSISAFYWMDRAS 576
           V +LMIDSI AF+W DR S
Sbjct: 184 VGVLMIDSIGAFHWTDRLS 202


>ref|NP_201257.2| DNA repair protein XRCC2-like protein [Arabidopsis thaliana]
           gi|332010527|gb|AED97910.1| DNA repair protein
           XRCC2-like protein [Arabidopsis thaliana]
          Length = 342

 Score =  200 bits (508), Expect = 2e-49
 Identities = 105/199 (52%), Positives = 134/199 (67%), Gaps = 7/199 (3%)
 Frame = +1

Query: 1   EVRSWIKGDETAKEMXXXXXXXXXXXXXXXXXXXXXXXGNVVEILGPSPSAKTQVLIQAA 180
           E RSWI+GDETAK+M                       GNVVEI G S SAKTQ+LIQAA
Sbjct: 5   EARSWIRGDETAKQMLSRVLKDRAFLLIPPLHRVPLRAGNVVEITGASTSAKTQILIQAA 64

Query: 181 INCILPKEWKGVYFGGLERLVMYIDLDCRFDIQRLSDSLKHHINEANEVRN-------ED 339
           I+CILPK W G+++GGL +LV+++DLDCRFD+ RLS  LKH + +AN + N       E 
Sbjct: 65  ISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANWLGNGAWWQLEES 124

Query: 340 LLKRLKRNYTTSTSVFDEELYLSCMRRFLYVRCYNSLEFLATLKTLRFRLEKEREAHGVG 519
            +K  K     + +VFDEELY SCM+RFLYVRCY+SLE L++LKTL +R++ ++EA G  
Sbjct: 125 NVKSCKSAEEKTKTVFDEELYASCMKRFLYVRCYDSLELLSSLKTLHYRIQ-QQEACGSQ 183

Query: 520 VHLLMIDSISAFYWMDRAS 576
           V +LMIDSI AF+W DR S
Sbjct: 184 VGVLMIDSIGAFHWTDRLS 202


>dbj|BAB11419.1| unnamed protein product [Arabidopsis thaliana]
          Length = 403

 Score =  200 bits (508), Expect = 2e-49
 Identities = 105/199 (52%), Positives = 134/199 (67%), Gaps = 7/199 (3%)
 Frame = +1

Query: 1   EVRSWIKGDETAKEMXXXXXXXXXXXXXXXXXXXXXXXGNVVEILGPSPSAKTQVLIQAA 180
           E RSWI+GDETAK+M                       GNVVEI G S SAKTQ+LIQAA
Sbjct: 5   EARSWIRGDETAKQMLSRVLKDRAFLLIPPLHRVPLRAGNVVEITGASTSAKTQILIQAA 64

Query: 181 INCILPKEWKGVYFGGLERLVMYIDLDCRFDIQRLSDSLKHHINEANEVRN-------ED 339
           I+CILPK W G+++GGL +LV+++DLDCRFD+ RLS  LKH + +AN + N       E 
Sbjct: 65  ISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANWLGNGAWWQLEES 124

Query: 340 LLKRLKRNYTTSTSVFDEELYLSCMRRFLYVRCYNSLEFLATLKTLRFRLEKEREAHGVG 519
            +K  K     + +VFDEELY SCM+RFLYVRCY+SLE L++LKTL +R++ ++EA G  
Sbjct: 125 NVKSCKSAEEKTKTVFDEELYASCMKRFLYVRCYDSLELLSSLKTLHYRIQ-QQEACGSQ 183

Query: 520 VHLLMIDSISAFYWMDRAS 576
           V +LMIDSI AF+W DR S
Sbjct: 184 VGVLMIDSIGAFHWTDRLS 202