BLASTX nr result

ID: Coptis21_contig00027102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027102
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABP98984.1| DMC1 [Hieracium caespitosum] gi|145952328|gb|ABP9...   184   5e-45
ref|XP_004134116.1| PREDICTED: meiotic recombination protein DMC...   183   1e-44
sp|P37384.1|DMC1_LILLO RecName: Full=Meiotic recombination prote...   182   2e-44
ref|NP_001238425.1| meiotic recombination protein DMC1 homolog [...   179   2e-43
ref|NP_001065738.1| Os11g0146800 [Oryza sativa Japonica Group] g...   177   1e-42

>gb|ABP98984.1| DMC1 [Hieracium caespitosum] gi|145952328|gb|ABP98985.1| DMC1
           [Hieracium caespitosum]
          Length = 343

 Score =  184 bits (468), Expect = 5e-45
 Identities = 90/94 (95%), Positives = 94/94 (100%)
 Frame = +1

Query: 1   LAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLMFRKG 180
           LAQMLSRLTKIAEEFNVAVYMTNQVIADPGGG+FISDPKKPAGGHVLAHAATVRLMFRKG
Sbjct: 250 LAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHAATVRLMFRKG 309

Query: 181 KGEQRVCKVFDSPNLPESEAVFQITAGGIADAKD 282
           KGEQRVCKVFD+PNLPESEA+FQIT+GGIADAKD
Sbjct: 310 KGEQRVCKVFDAPNLPESEAIFQITSGGIADAKD 343


>ref|XP_004134116.1| PREDICTED: meiotic recombination protein DMC1 homolog [Cucumis
           sativus] gi|449504138|ref|XP_004162263.1| PREDICTED:
           meiotic recombination protein DMC1 homolog [Cucumis
           sativus]
          Length = 345

 Score =  183 bits (464), Expect = 1e-44
 Identities = 88/94 (93%), Positives = 93/94 (98%)
 Frame = +1

Query: 1   LAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLMFRKG 180
           LAQMLSRLTKIAEEFNVAVYMTNQV+ADPGGG+F+SDPKKPAGGHVLAHAATVRLMFRKG
Sbjct: 252 LAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLMFRKG 311

Query: 181 KGEQRVCKVFDSPNLPESEAVFQITAGGIADAKD 282
           KGEQR+CKVFD+PNLPESEAVFQIT GGIADAKD
Sbjct: 312 KGEQRICKVFDAPNLPESEAVFQITPGGIADAKD 345


>sp|P37384.1|DMC1_LILLO RecName: Full=Meiotic recombination protein DMC1 homolog
           gi|431168|dbj|BAA04845.1| RAD51-like protein [Lilium
           longiflorum]
          Length = 349

 Score =  182 bits (463), Expect = 2e-44
 Identities = 89/94 (94%), Positives = 92/94 (97%)
 Frame = +1

Query: 1   LAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLMFRKG 180
           LAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLM RKG
Sbjct: 256 LAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLMLRKG 315

Query: 181 KGEQRVCKVFDSPNLPESEAVFQITAGGIADAKD 282
           KGEQRVCK+FD+PNLPESEAVFQIT GG+ADAKD
Sbjct: 316 KGEQRVCKIFDAPNLPESEAVFQITPGGVADAKD 349


>ref|NP_001238425.1| meiotic recombination protein DMC1 homolog [Glycine max]
           gi|3219787|sp|Q96449.1|DMC1_SOYBN RecName: Full=Meiotic
           recombination protein DMC1 homolog
           gi|1518157|gb|AAB07025.1| RecA/Rad51/DMC1-like protein
           [Glycine max]
          Length = 345

 Score =  179 bits (455), Expect = 2e-43
 Identities = 86/94 (91%), Positives = 93/94 (98%)
 Frame = +1

Query: 1   LAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLMFRKG 180
           LAQMLSRL KIAEEFNVAVYMTNQVI+DPGGG+F++DPKKPAGGHVLAHAATVRLMFRKG
Sbjct: 252 LAQMLSRLIKIAEEFNVAVYMTNQVISDPGGGVFVTDPKKPAGGHVLAHAATVRLMFRKG 311

Query: 181 KGEQRVCKVFDSPNLPESEAVFQITAGGIADAKD 282
           KGEQR+CKVFD+PNLPE+EAVFQITAGGIADAKD
Sbjct: 312 KGEQRICKVFDAPNLPEAEAVFQITAGGIADAKD 345


>ref|NP_001065738.1| Os11g0146800 [Oryza sativa Japonica Group]
           gi|21322144|gb|AAK55555.2|AF375982_1 Dmc1 [Oryza sativa
           Japonica Group] gi|14588672|dbj|BAB61838.1| RiLIM15B
           [Oryza sativa] gi|18700485|dbj|BAB85214.1| DMC1 [Oryza
           sativa Japonica Group] gi|21805945|gb|AAM76792.1| Dmc1
           protein type B [Oryza sativa Indica Group]
           gi|113644442|dbj|BAF27583.1| Os11g0146800 [Oryza sativa
           Japonica Group]
          Length = 344

 Score =  177 bits (448), Expect = 1e-42
 Identities = 84/94 (89%), Positives = 91/94 (96%)
 Frame = +1

Query: 1   LAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLMFRKG 180
           LAQMLSRLTKIAEEFNVAVY+TNQVIADPGGGMFI+DPKKPAGGHVLAHAAT+RLM RKG
Sbjct: 251 LAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHVLAHAATIRLMLRKG 310

Query: 181 KGEQRVCKVFDSPNLPESEAVFQITAGGIADAKD 282
           KGEQRVCK+FD+PNLPE EAVFQ+T+GGI DAKD
Sbjct: 311 KGEQRVCKIFDAPNLPEGEAVFQVTSGGIMDAKD 344


Top