BLASTX nr result

ID: Coptis21_contig00027097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027097
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304121.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_002272432.2| PREDICTED: uncharacterized protein LOC100249...    84   9e-15
emb|CBI35848.3| unnamed protein product [Vitis vinifera]               84   9e-15
ref|XP_002277684.1| PREDICTED: uncharacterized protein LOC100257...    83   3e-14
ref|XP_003529839.1| PREDICTED: uncharacterized protein LOC100808...    82   6e-14

>ref|XP_002304121.1| predicted protein [Populus trichocarpa] gi|222841553|gb|EEE79100.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   SRMEKLLRTLLHKKIYPQNSS-TTSVKKYLGDRHSSKNNKEEDQHEEKRDSGCKWVKTDS 177
           SRMEKLLRTLLHKKI PQ++S  +S+KKY+ DR + K +KE+D+  +K  +G KWVKTDS
Sbjct: 188 SRMEKLLRTLLHKKINPQSTSRASSMKKYIEDRSTPKKDKEDDEKRDKTSNGSKWVKTDS 247

Query: 178 EYIVLEI 198
           EYIVLEI
Sbjct: 248 EYIVLEI 254


>ref|XP_002272432.2| PREDICTED: uncharacterized protein LOC100249804 [Vitis vinifera]
          Length = 260

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/68 (66%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = +1

Query: 1   SRMEKLLRTLLHKKIYPQNSS-TTSVKKYLGDRHSSK-NNKEEDQHEEKRDSGCKWVKTD 174
           SRMEKLLR +LHKKIYPQNSS  +S+KKYL D+   K  N++E Q + K   G KWVKTD
Sbjct: 193 SRMEKLLRAMLHKKIYPQNSSRASSMKKYLEDKQRPKRENEDEVQEKHKAKDGYKWVKTD 252

Query: 175 SEYIVLEI 198
           SEYIVLEI
Sbjct: 253 SEYIVLEI 260


>emb|CBI35848.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/68 (66%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = +1

Query: 1   SRMEKLLRTLLHKKIYPQNSS-TTSVKKYLGDRHSSK-NNKEEDQHEEKRDSGCKWVKTD 174
           SRMEKLLR +LHKKIYPQNSS  +S+KKYL D+   K  N++E Q + K   G KWVKTD
Sbjct: 172 SRMEKLLRAMLHKKIYPQNSSRASSMKKYLEDKQRPKRENEDEVQEKHKAKDGYKWVKTD 231

Query: 175 SEYIVLEI 198
           SEYIVLEI
Sbjct: 232 SEYIVLEI 239


>ref|XP_002277684.1| PREDICTED: uncharacterized protein LOC100257848 [Vitis vinifera]
          Length = 266

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   SRMEKLLRTLLHKKIYPQNSSTT-SVKKYLGDRHSSKNNKEEDQHEEKRDSGCKWVKTDS 177
           SRM+K+LR LLHKKIYPQ+SS+T S+ +YL +RH  K++  ED+  EK   G KWVKTDS
Sbjct: 201 SRMDKILRLLLHKKIYPQSSSSTLSIMRYLANRHMPKSD-NEDEVNEKVTEGSKWVKTDS 259

Query: 178 EYIVLEI 198
           EYIVLEI
Sbjct: 260 EYIVLEI 266


>ref|XP_003529839.1| PREDICTED: uncharacterized protein LOC100808146 [Glycine max]
          Length = 263

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   SRMEKLLRTLLHKKIYPQNSSTTS-VKKYLGDRHSSKNNKEEDQHEEKRDSGCKWVKTDS 177
           SRMEKLLRT+LHKKIY QNSS +  VKK + D+  ++  + ED+ +E+   GCKWVKTDS
Sbjct: 198 SRMEKLLRTMLHKKIYTQNSSRSPLVKKGIEDKKMTRK-RNEDESDERNGDGCKWVKTDS 256

Query: 178 EYIVLEI 198
           EYIVLEI
Sbjct: 257 EYIVLEI 263


Top