BLASTX nr result

ID: Coptis21_contig00027095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027095
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532492.1| Golgin-84, putative [Ricinus communis] gi|22...    74   9e-12
emb|CBI15559.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002278278.1| PREDICTED: golgin candidate 2-like [Vitis vi...    71   8e-11
ref|XP_004160442.1| PREDICTED: golgin candidate 2-like [Cucumis ...    71   1e-10
ref|XP_004137552.1| PREDICTED: golgin candidate 2-like [Cucumis ...    71   1e-10

>ref|XP_002532492.1| Golgin-84, putative [Ricinus communis] gi|223527791|gb|EEF29891.1|
           Golgin-84, putative [Ricinus communis]
          Length = 691

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 44/74 (59%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
 Frame = +2

Query: 74  MSNWISSKLKVAETFLQQIDQTAAESLKKGENT-RSDELNYNHQTIVTRKVESIVPLKDQ 250
           MSNWISSKLKVAETF +QIDQ AAESLKK E +  S++  +N  T      +  VPLKDQ
Sbjct: 1   MSNWISSKLKVAETFFEQIDQQAAESLKKNERSLGSEDEKFNVPTKTGLGGDKTVPLKDQ 60

Query: 251 LKKKNS-LETPLRN 289
           LKKK S LET + +
Sbjct: 61  LKKKKSTLETRINS 74


>emb|CBI15559.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/63 (61%), Positives = 45/63 (71%)
 Frame = +2

Query: 74  MSNWISSKLKVAETFLQQIDQTAAESLKKGENTRSDELNYNHQTIVTRKVESIVPLKDQL 253
           M+ WISSKLKVAET LQQIDQ AAESL K E  +SDEL+      +  K   ++PLKDQL
Sbjct: 1   MAGWISSKLKVAETLLQQIDQQAAESLGKNERPQSDELDEK----IPAKSGGVLPLKDQL 56

Query: 254 KKK 262
           KKK
Sbjct: 57  KKK 59


>ref|XP_002278278.1| PREDICTED: golgin candidate 2-like [Vitis vinifera]
          Length = 682

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/63 (61%), Positives = 45/63 (71%)
 Frame = +2

Query: 74  MSNWISSKLKVAETFLQQIDQTAAESLKKGENTRSDELNYNHQTIVTRKVESIVPLKDQL 253
           M+ WISSKLKVAET LQQIDQ AAESL K E  +SDEL+      +  K   ++PLKDQL
Sbjct: 1   MAGWISSKLKVAETLLQQIDQQAAESLGKNERPQSDELDEK----IPAKSGGVLPLKDQL 56

Query: 254 KKK 262
           KKK
Sbjct: 57  KKK 59


>ref|XP_004160442.1| PREDICTED: golgin candidate 2-like [Cucumis sativus]
          Length = 662

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/74 (54%), Positives = 49/74 (66%)
 Frame = +2

Query: 74  MSNWISSKLKVAETFLQQIDQTAAESLKKGENTRSDELNYNHQTIVTRKVESIVPLKDQL 253
           M+NWISSKLK AE+ LQQIDQ AAESLKKGE  +   ++Y        K   I+PLKDQL
Sbjct: 1   MANWISSKLKAAESILQQIDQQAAESLKKGE--KPPAVDYLE---AAGKAGDILPLKDQL 55

Query: 254 KKKNSLETPLRNDI 295
           KKKN ++   R  +
Sbjct: 56  KKKNQVDNDYRRKL 69


>ref|XP_004137552.1| PREDICTED: golgin candidate 2-like [Cucumis sativus]
          Length = 716

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/74 (54%), Positives = 49/74 (66%)
 Frame = +2

Query: 74  MSNWISSKLKVAETFLQQIDQTAAESLKKGENTRSDELNYNHQTIVTRKVESIVPLKDQL 253
           M+NWISSKLK AE+ LQQIDQ AAESLKKGE  +   ++Y        K   I+PLKDQL
Sbjct: 1   MANWISSKLKAAESILQQIDQQAAESLKKGE--KPPAVDYLE---AAGKAGDILPLKDQL 55

Query: 254 KKKNSLETPLRNDI 295
           KKKN ++   R  +
Sbjct: 56  KKKNQVDNDYRRKL 69


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