BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027094
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                165   1e-38
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]   118   1e-24
emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]   118   2e-24
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   117   2e-24
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   117   2e-24

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  165 bits (417), Expect = 1e-38
 Identities = 84/225 (37%), Positives = 136/225 (60%), Gaps = 6/225 (2%)
 Frame = +3

Query: 153 QRDMMWKSVFLPILRNFSLLDLVTGKEICPDQFLSDERGNSTNQLNLAYVDWVRRDQTLL 332
           Q  + W+S+F+P+L+ F L+ LV G+++CP  F+ D  G      N ++  W  RDQ L+
Sbjct: 281 QNYITWRSLFIPVLKRFKLIGLVNGEDLCPPPFVRDPSGTCVP--NASFETWCERDQILM 338

Query: 333 IWFNATMSIEMLPYVVGISTSHELWKSLEKRFATITTAFVMQLKGKLQDMKKGNASVASY 512
           IW N+T+S ++LP  +G+  S  LW+SLE+RF+  +   V  L+ K+Q + KG++S+  +
Sbjct: 339 IWINSTLSKDLLPLTIGMEDSRSLWQSLERRFSGASRTHVHSLRSKIQTIHKGDSSMTDF 398

Query: 513 LQNIKQITDSLAASGHIIKDEDLVFYILRGLTSDYKPFVTSIRTRQQPVSSDELHGXXXX 692
           L +IK+I++ LAA+G  + + DLV YIL GL  +Y+ FV SI TR + V++DELHG    
Sbjct: 399 LNSIKEISNKLAAAGEPLSESDLVAYILSGLPDEYESFVDSIETRNESVTADELHGLLLS 458

Query: 693 XXXXXXXXVTENNSS-----HAFSTTREYAPHYANF-RGSYRGSY 809
                    T  +SS     HA++   + + H  +F +G+ RG +
Sbjct: 459 KEISLQKRKTRASSSSNAPFHAYAA--QSSTHVGHFNKGNSRGRF 501


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score =  118 bits (296), Expect = 1e-24
 Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 5/225 (2%)
 Frame = +3

Query: 132 SCSIKAGQRDMMWKSVFLPILRNFSLLDLVTGKEICPDQFLSDERGNSTNQLNLAYVDWV 311
           S  +      + WK  FL +LR   L+  + G E CP +        ++  LN AYV W 
Sbjct: 22  SVKLDGSHNYLAWKMQFLNLLRGHDLMGFIDGTEACPPKH------TASGSLNPAYVVWQ 75

Query: 312 RRDQTLLIWFNATMSIEMLPYVVGISTSHELWKSLEKRFATITTAFVMQLKGKLQDMKKG 491
           ++D  LL W  A++S +++  + G+ TS ++W +L+ RF++ + + +  LK +LQ + +G
Sbjct: 76  KKDVCLLGWILASLSEKLVSTIYGLETSKQVWTALQTRFSSQSRSRISHLKRQLQTLTQG 135

Query: 492 NASVASYLQNIKQITDSLAASGHIIKDEDLVFYILRGLTSDYKPFVTSIR--TRQQPVSS 665
             S + YL++ K + D LAA+G  + D+DL+ ++L GL S Y PFVTS    +R+   + 
Sbjct: 136 TKSCSEYLESAKTLADQLAAAGKPVDDQDLISFLLGGLQSSYTPFVTSFNFASRETDFTF 195

Query: 666 DELHGXXXXXXXXXXXXVTENNSS---HAFSTTREYAPHYANFRG 791
           ++                + +N+     AF+  +  AP Y   +G
Sbjct: 196 EDFQAELLGYENLLDVNHSVHNTDGPHFAFAANKSKAPTYVQKKG 240


>emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]
          Length = 2220

 Score =  118 bits (295), Expect = 2e-24
 Identities = 60/172 (34%), Positives = 101/172 (58%)
 Frame = +3

Query: 162  MMWKSVFLPILRNFSLLDLVTGKEICPDQFLSDERGNSTNQLNLAYVDWVRRDQTLLIWF 341
            ++WKS    ++      D + G  ICPD+ LS      +  +N A+V W R+D+T+L W 
Sbjct: 888  ILWKSQIDNVVFANGFEDFIDGFSICPDKELS------SGLINPAFVAWRRQDRTILSWL 941

Query: 342  NATMSIEMLPYVVGISTSHELWKSLEKRFATITTAFVMQLKGKLQDMKKGNASVASYLQN 521
             ++++  ++  ++G ++SH  W +LEK F++ + A +MQL+ +LQ  KKG+ S+  Y+  
Sbjct: 942  YSSLTPAIMAQIIGHNSSHSAWNALEKTFSSSSRARIMQLRLELQSTKKGSLSMIDYIMK 1001

Query: 522  IKQITDSLAASGHIIKDEDLVFYILRGLTSDYKPFVTSIRTRQQPVSSDELH 677
            +K   DSLAA G  + ++D V  +L GL SDY   VT+I  R   +S + +H
Sbjct: 1002 VKGAADSLAAIGEPVSEQDQVMNLLGGLGSDYNAVVTAINIRDDKISIEAVH 1053


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  117 bits (294), Expect = 2e-24
 Identities = 65/223 (29%), Positives = 111/223 (49%)
 Frame = +3

Query: 162 MMWKSVFLPILRNFSLLDLVTGKEICPDQFLSDERGNSTNQLNLAYVDWVRRDQTLLIWF 341
           ++W+S    ++      D + G  ICP++ LS         +N A+V W R+D+T+L W 
Sbjct: 46  ILWRSQIDNVIFANGFEDFIDGTSICPEKDLSP------GVMNPAFVAWRRQDRTILSWI 99

Query: 342 NATMSIEMLPYVVGISTSHELWKSLEKRFATITTAFVMQLKGKLQDMKKGNASVASYLQN 521
            ++++  ++  ++G +TSH  W +LE  F++ + A +MQL+ +LQ  KKG+ S+  Y+  
Sbjct: 100 YSSLTPGIMAQIIGHNTSHSAWNALESIFSSSSRARIMQLRLELQSTKKGSMSMIDYIMK 159

Query: 522 IKQITDSLAASGHIIKDEDLVFYILRGLTSDYKPFVTSIRTRQQPVSSDELHGXXXXXXX 701
           IK   D+LAA G  + ++D V  +L GL SDY   VT+I  R   +S + +H        
Sbjct: 160 IKGAADNLAAIGEPVSEQDQVMNLLGGLGSDYNAVVTAINIRDDKISLEAIHSMLLAFEH 219

Query: 702 XXXXXVTENNSSHAFSTTREYAPHYANFRGSYRGSYQPQRENY 830
                 +    S  ++++         F G     Y P   NY
Sbjct: 220 RLEQQSSIEQMSANYASSSNNRGGGRKFNGGRGQGYSPNNNNY 262


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
           gi|531389|gb|AAA57005.1| copia-like retrotransposon
           Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  117 bits (294), Expect = 2e-24
 Identities = 59/172 (34%), Positives = 99/172 (57%)
 Frame = +3

Query: 162 MMWKSVFLPILRNFSLLDLVTGKEICPDQFLSDERGNSTNQLNLAYVDWVRRDQTLLIWF 341
           ++WK+  LP +R   L D++TG EICP + +SD    +    N AY  W+ RDQ +L + 
Sbjct: 30  LLWKAQVLPAIRAAQLDDILTGVEICPPKTISDASDRTVTVANPAYGRWIARDQAVLGYL 89

Query: 342 NATMSIEMLPYVVGISTSHELWKSLEKRFATITTAFVMQLKGKLQDMKKGNASVASYLQN 521
            +++S E+L  VV  STS  +W +L + +++ + A  +  +  L   KKG +SVA Y   
Sbjct: 90  LSSLSREVLSSVVNCSTSASVWTTLSEMYSSHSRARKVNTRIALATTKKGASSVAEYFAK 149

Query: 522 IKQITDSLAASGHIIKDEDLVFYILRGLTSDYKPFVTSIRTRQQPVSSDELH 677
           ++   D L A+G  + DE+ V ++L GL  D+ P VT++  R  P++  +L+
Sbjct: 150 MRGFADELGAAGKPLDDEEFVSFLLTGLDEDFNPLVTAVVARSDPITPGDLY 201