BLASTX nr result

ID: Coptis21_contig00027087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027087
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23601.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002284663.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    76   3e-12
emb|CAN66006.1| hypothetical protein VITISV_042886 [Vitis vinifera]    76   3e-12
ref|XP_002284676.2| PREDICTED: 1-aminocyclopropane-1-carboxylate...    73   2e-11
emb|CBI23603.3| unnamed protein product [Vitis vinifera]               73   2e-11

>emb|CBI23601.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 33/51 (64%), Positives = 43/51 (84%)
 Frame = +3

Query: 18  REHESKVYGPIKELLSEDDPPKYRGTTAAEYITFYKSKGLDGKSTLPHFTI 170
           RE+ S++YGPIKELLSE++PP YR TT  E++T+Y SKGLDG S+LPHF +
Sbjct: 296 RENNSRLYGPIKELLSEENPPIYRETTVDEFLTYYFSKGLDGNSSLPHFKL 346


>ref|XP_002284663.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
           [Vitis vinifera]
          Length = 373

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 33/51 (64%), Positives = 43/51 (84%)
 Frame = +3

Query: 18  REHESKVYGPIKELLSEDDPPKYRGTTAAEYITFYKSKGLDGKSTLPHFTI 170
           RE+ S++YGPIKELLSE++PP YR TT  E++T+Y SKGLDG S+LPHF +
Sbjct: 323 RENNSRLYGPIKELLSEENPPIYRETTVDEFLTYYFSKGLDGNSSLPHFKL 373


>emb|CAN66006.1| hypothetical protein VITISV_042886 [Vitis vinifera]
          Length = 373

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 33/51 (64%), Positives = 43/51 (84%)
 Frame = +3

Query: 18  REHESKVYGPIKELLSEDDPPKYRGTTAAEYITFYKSKGLDGKSTLPHFTI 170
           RE+ S++YGPIKELLSE++PP YR TT  E++T+Y SKGLDG S+LPHF +
Sbjct: 323 RENNSRLYGPIKELLSEENPPIYRETTVDEFLTYYFSKGLDGNSSLPHFKL 373


>ref|XP_002284676.2| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 684

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 31/50 (62%), Positives = 42/50 (84%)
 Frame = +3

Query: 21  EHESKVYGPIKELLSEDDPPKYRGTTAAEYITFYKSKGLDGKSTLPHFTI 170
           E+ S++YGP+KELLSE++PP YR TT  E++T+Y SKGLDG S+LPHF +
Sbjct: 635 ENNSRLYGPVKELLSEENPPIYRETTLDEFLTYYFSKGLDGNSSLPHFKL 684



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/50 (60%), Positives = 41/50 (82%)
 Frame = +3

Query: 21  EHESKVYGPIKELLSEDDPPKYRGTTAAEYITFYKSKGLDGKSTLPHFTI 170
           ++ S++YGPIKELLSE++PP YR TT  E++ +Y SKGLDG S+LPHF +
Sbjct: 324 QNNSRLYGPIKELLSEENPPIYRETTVDEFLAYYFSKGLDGNSSLPHFKL 373


>emb|CBI23603.3| unnamed protein product [Vitis vinifera]
          Length = 207

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 31/50 (62%), Positives = 42/50 (84%)
 Frame = +3

Query: 21  EHESKVYGPIKELLSEDDPPKYRGTTAAEYITFYKSKGLDGKSTLPHFTI 170
           E+ S++YGP+KELLSE++PP YR TT  E++T+Y SKGLDG S+LPHF +
Sbjct: 158 ENNSRLYGPVKELLSEENPPIYRETTLDEFLTYYFSKGLDGNSSLPHFKL 207


Top