BLASTX nr result

ID: Coptis21_contig00027069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027069
         (853 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29881.3| unnamed protein product [Vitis vinifera]              314   2e-83
ref|XP_002277537.1| PREDICTED: protein TRANSPARENT TESTA 1 [Viti...   314   2e-83
ref|XP_002323306.1| predicted protein [Populus trichocarpa] gi|2...   310   2e-82
ref|XP_002526735.1| TRANSPARENT TESTA 1 protein, putative [Ricin...   310   3e-82
ref|XP_003553422.1| PREDICTED: protein TRANSPARENT TESTA 1-like ...   305   8e-81

>emb|CBI29881.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  314 bits (804), Expect = 2e-83
 Identities = 144/167 (86%), Positives = 150/167 (89%)
 Frame = -3

Query: 503 ALNIGLPSPSSEDLVSMICPSTEIIDKGVSVDSSVGYSTTRLNKGQYWIPTPSQILIGPT 324
           AL+IGLPSPS+ ++ SM+  S+EI DK    D S GY   RLNKGQYWIPTPSQILIGPT
Sbjct: 94  ALHIGLPSPSAAEMASMLSSSSEITDKDGDGDVS-GYPINRLNKGQYWIPTPSQILIGPT 152

Query: 323 QFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCRNNID 144
           QFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPT MLRLPCYCCAPGCRNNID
Sbjct: 153 QFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNID 212

Query: 143 HPRAKPLKDFRTLQTHSKRKHGIKPFMCRKCSKAFAVRGDWRTHEKN 3
           HPRAKPLKDFRTLQTH KRKHGIKPFMCRKC KAFAVRGDWRTHEKN
Sbjct: 213 HPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKN 259


>ref|XP_002277537.1| PREDICTED: protein TRANSPARENT TESTA 1 [Vitis vinifera]
          Length = 345

 Score =  314 bits (804), Expect = 2e-83
 Identities = 144/167 (86%), Positives = 150/167 (89%)
 Frame = -3

Query: 503 ALNIGLPSPSSEDLVSMICPSTEIIDKGVSVDSSVGYSTTRLNKGQYWIPTPSQILIGPT 324
           AL+IGLPSPS+ ++ SM+  S+EI DK    D S GY   RLNKGQYWIPTPSQILIGPT
Sbjct: 124 ALHIGLPSPSAAEMASMLSSSSEITDKDGDGDVS-GYPINRLNKGQYWIPTPSQILIGPT 182

Query: 323 QFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCRNNID 144
           QFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPT MLRLPCYCCAPGCRNNID
Sbjct: 183 QFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNID 242

Query: 143 HPRAKPLKDFRTLQTHSKRKHGIKPFMCRKCSKAFAVRGDWRTHEKN 3
           HPRAKPLKDFRTLQTH KRKHGIKPFMCRKC KAFAVRGDWRTHEKN
Sbjct: 243 HPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKN 289


>ref|XP_002323306.1| predicted protein [Populus trichocarpa] gi|222867936|gb|EEF05067.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score =  310 bits (795), Expect = 2e-82
 Identities = 141/167 (84%), Positives = 151/167 (90%)
 Frame = -3

Query: 503 ALNIGLPSPSSEDLVSMICPSTEIIDKGVSVDSSVGYSTTRLNKGQYWIPTPSQILIGPT 324
           AL+IGLPSPS+ ++ +++  S+EI DK    D SV Y  +RLNKGQYWIPTPSQILIGPT
Sbjct: 137 ALHIGLPSPSAAEMATVLSSSSEITDKDGDGDDSV-YPISRLNKGQYWIPTPSQILIGPT 195

Query: 323 QFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCRNNID 144
           QFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPT MLRLPCYCCAPGC+NNID
Sbjct: 196 QFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCKNNID 255

Query: 143 HPRAKPLKDFRTLQTHSKRKHGIKPFMCRKCSKAFAVRGDWRTHEKN 3
           HPRAKPLKDFRTLQTH KRKHGIKPFMCRKC KAFAVRGDWRTHEKN
Sbjct: 256 HPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKN 302


>ref|XP_002526735.1| TRANSPARENT TESTA 1 protein, putative [Ricinus communis]
           gi|223533924|gb|EEF35649.1| TRANSPARENT TESTA 1 protein,
           putative [Ricinus communis]
          Length = 344

 Score =  310 bits (793), Expect = 3e-82
 Identities = 141/170 (82%), Positives = 151/170 (88%), Gaps = 3/170 (1%)
 Frame = -3

Query: 503 ALNIGLPSPSSEDLVSMICPSTEII---DKGVSVDSSVGYSTTRLNKGQYWIPTPSQILI 333
           AL+IGLPSPS+ ++ S++  S+++I   D G   DS+  Y   RLNKGQYWIPTPSQILI
Sbjct: 119 ALHIGLPSPSAAEMASVLSSSSDVITEKDIGDGDDSTTEYPINRLNKGQYWIPTPSQILI 178

Query: 332 GPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCRN 153
           GPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPT MLRLPCYCCAPGCRN
Sbjct: 179 GPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRN 238

Query: 152 NIDHPRAKPLKDFRTLQTHSKRKHGIKPFMCRKCSKAFAVRGDWRTHEKN 3
           NIDHPRAKPLKDFRTLQTH KRKHGIKPFMCRKC KAFAVRGDWRTHEKN
Sbjct: 239 NIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKN 288


>ref|XP_003553422.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Glycine max]
          Length = 349

 Score =  305 bits (781), Expect = 8e-81
 Identities = 140/171 (81%), Positives = 150/171 (87%), Gaps = 4/171 (2%)
 Frame = -3

Query: 503 ALNIGLPSPSSEDLVSMICPSTEIIDKGVSVDSSVGYSTT----RLNKGQYWIPTPSQIL 336
           AL+IGLPSPS+ ++ S++  S+EI DK    D +    ++    RLNKGQYWIPTPSQIL
Sbjct: 122 ALHIGLPSPSAAEMASVLSSSSEITDKDQHGDGAAEDHSSAGGFRLNKGQYWIPTPSQIL 181

Query: 335 IGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCR 156
           IGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPT MLRLPCYCCAPGCR
Sbjct: 182 IGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCR 241

Query: 155 NNIDHPRAKPLKDFRTLQTHSKRKHGIKPFMCRKCSKAFAVRGDWRTHEKN 3
           NNIDHPRAKPLKDFRTLQTH KRKHGIKPFMCRKC KAFAVRGDWRTHEKN
Sbjct: 242 NNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKN 292


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