BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027060
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like...   108   4e-22
emb|CBI25868.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_003539104.1| PREDICTED: DNA repair endonuclease UVH1-like...    94   1e-17
ref|XP_002326681.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago trunc...    92   4e-17

>ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like [Vitis vinifera]
          Length = 964

 Score =  108 bits (270), Expect = 4e-22
 Identities = 67/138 (48%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
 Frame = -2

Query: 411 MVQFHEHIISDLLEDNNNGLVXXXXXXXXXXXXXXXXXXXXXSQNTLLILSATPSQKSSI 232
           MVQFHEHII++LLED+N GLV                     SQ +LL+LS++PSQK  I
Sbjct: 1   MVQFHEHIITELLEDSNGGLVVLSSGLCLPKLISSLLLLHHPSQGSLLLLSSSPSQKQLI 60

Query: 231 TNSLLQNSTNPNP-LPQEITSELSAPHXXXXXXXXXXXXXXXXXXIVDLLTSRIPTSLIS 55
              L  N  NPNP LP EIT++L A H                  IVDLLTSR+PTS I+
Sbjct: 61  LYHLDANP-NPNPNLPSEITADLPAHHRHSLYTSGSVFFITSRILIVDLLTSRVPTSGIA 119

Query: 54  GLIILNAHHITDTCTESF 1
           GLIILNAH +++TCTE+F
Sbjct: 120 GLIILNAHSLSETCTEAF 137


>emb|CBI25868.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score =  107 bits (266), Expect = 1e-21
 Identities = 66/146 (45%), Positives = 85/146 (58%), Gaps = 1/146 (0%)
 Frame = -2

Query: 435 RHLQKGKKMVQFHEHIISDLLEDNNNGLVXXXXXXXXXXXXXXXXXXXXXSQNTLLILSA 256
           R ++K +  + FHEHII++LLED+N GLV                     SQ +LL+LS+
Sbjct: 227 RRMKKSEGDLNFHEHIITELLEDSNGGLVVLSSGLCLPKLISSLLLLHHPSQGSLLLLSS 286

Query: 255 TPSQKSSITNSLLQNSTNPNP-LPQEITSELSAPHXXXXXXXXXXXXXXXXXXIVDLLTS 79
           +PSQK  I   L  N  NPNP LP EIT++L A H                  IVDLLTS
Sbjct: 287 SPSQKQLILYHLDANP-NPNPNLPSEITADLPAHHRHSLYTSGSVFFITSRILIVDLLTS 345

Query: 78  RIPTSLISGLIILNAHHITDTCTESF 1
           R+PTS I+GLIILNAH +++TCTE+F
Sbjct: 346 RVPTSGIAGLIILNAHSLSETCTEAF 371


>ref|XP_003539104.1| PREDICTED: DNA repair endonuclease UVH1-like [Glycine max]
          Length = 967

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 59/138 (42%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
 Frame = -2

Query: 411 MVQFHEHIISDLLEDNNNGLVXXXXXXXXXXXXXXXXXXXXXSQNTLLILS-ATPSQKSS 235
           MVQFHEHII++LLED+N GLV                     SQ TLL+LS ++ S KS 
Sbjct: 1   MVQFHEHIITELLEDSNGGLVVLSSGLALSKLIASLLILHSSSQGTLLLLSPSSTSLKSK 60

Query: 234 ITNSLLQNSTNPNPLPQEITSELSAPHXXXXXXXXXXXXXXXXXXIVDLLTSRIPTSLIS 55
           IT  L   +     +P EIT++L APH                  IVDLLT+++PTS I+
Sbjct: 61  ITFHLKTLNPQFYQIPAEITADLHAPHRHALYTSGNAFFITPRILIVDLLTNKLPTSKIA 120

Query: 54  GLIILNAHHITDTCTESF 1
           G+IILNAH +++T TE+F
Sbjct: 121 GIIILNAHSLSETSTEAF 138


>ref|XP_002326681.1| predicted protein [Populus trichocarpa] gi|222834003|gb|EEE72480.1|
           predicted protein [Populus trichocarpa]
          Length = 982

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 61/137 (44%), Positives = 77/137 (56%)
 Frame = -2

Query: 411 MVQFHEHIISDLLEDNNNGLVXXXXXXXXXXXXXXXXXXXXXSQNTLLILSATPSQKSSI 232
           MVQFHEHII+DLLED   GLV                     SQ TLLI S  P+ KS I
Sbjct: 1   MVQFHEHIITDLLEDPAGGLVILSSGLSLPKLVSSLLSLHSPSQGTLLIFSPPPTLKSLI 60

Query: 231 TNSLLQNSTNPNPLPQEITSELSAPHXXXXXXXXXXXXXXXXXXIVDLLTSRIPTSLISG 52
              L  ++TNPNP+  EIT++L + H                  IVDLL+++IPTS ++G
Sbjct: 61  ---LHHHNTNPNPI--EITADLPSHHRLSLYSSGQICFITPRILIVDLLSNKIPTSSLAG 115

Query: 51  LIILNAHHITDTCTESF 1
           LIILNAH I++T TE+F
Sbjct: 116 LIILNAHSISETSTEAF 132


>ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago truncatula]
           gi|355512726|gb|AES94349.1| DNA repair endonuclease UVH1
           [Medicago truncatula]
          Length = 984

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 55/137 (40%), Positives = 74/137 (54%)
 Frame = -2

Query: 411 MVQFHEHIISDLLEDNNNGLVXXXXXXXXXXXXXXXXXXXXXSQNTLLILSATPSQKSSI 232
           ++QFHEHII++LLED N GL                      SQ TLLILS +P+ KS I
Sbjct: 2   VLQFHEHIITELLEDTNGGLTILSSGLSLSKLISSLLLLHSSSQGTLLILSPSPTLKSKI 61

Query: 231 TNSLLQNSTNPNPLPQEITSELSAPHXXXXXXXXXXXXXXXXXXIVDLLTSRIPTSLISG 52
              L   +   + +P EIT++L   H                  IVDLLT+++PTS ISG
Sbjct: 62  NFHLKTLNPQLHQIPTEITADLPVNHRHSLYSSGHVCFITPRILIVDLLTNKLPTSTISG 121

Query: 51  LIILNAHHITDTCTESF 1
           ++ILNAH I++T TE+F
Sbjct: 122 MLILNAHSISETSTEAF 138