BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027052
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83161.1| hypothetical protein VITISV_022556 [Vitis vinifera]    60   1e-10
emb|CBI15766.3| unnamed protein product [Vitis vinifera]               60   1e-10
ref|XP_002284683.1| PREDICTED: pre-rRNA-processing protein ESF2 ...    60   1e-10
ref|XP_003618772.1| Pre-rRNA-processing protein esf2 [Medicago t...    62   5e-08
ref|XP_004172361.1| PREDICTED: pre-rRNA-processing protein esf2-...    61   8e-08

>emb|CAN83161.1| hypothetical protein VITISV_022556 [Vitis vinifera]
          Length = 486

 Score = 60.5 bits (145), Expect(2) = 1e-10
 Identities = 29/39 (74%), Positives = 30/39 (76%)
 Frame = -2

Query: 149 KLKKRGVCYLSRIPSHMDPTKLRQILSVCGDIQRIYLTP 33
           K  KRGVCYLSRIP HMD  KLR ILS  G+IQRIYL P
Sbjct: 43  KADKRGVCYLSRIPPHMDHVKLRHILSQYGEIQRIYLAP 81



 Score = 30.4 bits (67), Expect(2) = 1e-10
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -1

Query: 276 EERDQIVNCYIEEENVGDTEGNNQEMETRENSTKKHLLWGVEKVEK 139
           EE  +I      EE  G++EGN+++   R+N  KK LL    K +K
Sbjct: 3   EEEQEIKRTSHSEE--GESEGNDEKGRIRKNKLKKRLLKEASKADK 46


>emb|CBI15766.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score = 60.5 bits (145), Expect(2) = 1e-10
 Identities = 29/39 (74%), Positives = 30/39 (76%)
 Frame = -2

Query: 149 KLKKRGVCYLSRIPSHMDPTKLRQILSVCGDIQRIYLTP 33
           K  KRGVCYLSRIP HMD  KLR ILS  G+IQRIYL P
Sbjct: 130 KADKRGVCYLSRIPPHMDHVKLRHILSQYGEIQRIYLAP 168



 Score = 30.4 bits (67), Expect(2) = 1e-10
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -1

Query: 276 EERDQIVNCYIEEENVGDTEGNNQEMETRENSTKKHLLWGVEKVEK 139
           EE  +I      EE  G++EGN+++   R+N  KK LL    K +K
Sbjct: 90  EEEQEIKRTSHSEE--GESEGNDEKGRIRKNKLKKRLLKEASKADK 133


>ref|XP_002284683.1| PREDICTED: pre-rRNA-processing protein ESF2 [Vitis vinifera]
          Length = 257

 Score = 60.5 bits (145), Expect(2) = 1e-10
 Identities = 29/39 (74%), Positives = 30/39 (76%)
 Frame = -2

Query: 149 KLKKRGVCYLSRIPSHMDPTKLRQILSVCGDIQRIYLTP 33
           K  KRGVCYLSRIP HMD  KLR ILS  G+IQRIYL P
Sbjct: 43  KADKRGVCYLSRIPPHMDHVKLRHILSQYGEIQRIYLAP 81



 Score = 30.4 bits (67), Expect(2) = 1e-10
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -1

Query: 276 EERDQIVNCYIEEENVGDTEGNNQEMETRENSTKKHLLWGVEKVEK 139
           EE  +I      EE  G++EGN+++   R+N  KK LL    K +K
Sbjct: 3   EEEQEIKRTSHSEE--GESEGNDEKGRIRKNKLKKRLLKEASKADK 46


>ref|XP_003618772.1| Pre-rRNA-processing protein esf2 [Medicago truncatula]
           gi|355493787|gb|AES74990.1| Pre-rRNA-processing protein
           esf2 [Medicago truncatula]
          Length = 314

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/40 (72%), Positives = 31/40 (77%)
 Frame = -2

Query: 152 RKLKKRGVCYLSRIPSHMDPTKLRQILSVCGDIQRIYLTP 33
           +K   RGVCYLSRIP HMD  KLRQ+LS  GDIQRIYL P
Sbjct: 55  KKANMRGVCYLSRIPPHMDHVKLRQLLSQFGDIQRIYLAP 94


>ref|XP_004172361.1| PREDICTED: pre-rRNA-processing protein esf2-like, partial [Cucumis
           sativus]
          Length = 326

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -2

Query: 137 RGVCYLSRIPSHMDPTKLRQILSVCGDIQRIYLTP 33
           RG+CYLSR+P HMDP KLRQILS  G+IQRIYL P
Sbjct: 117 RGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAP 151