BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027048
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313287.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002513182.1| 23S rRNA methyltransferase, putative [Ricinu...    62   4e-08
ref|XP_003599101.1| tRNA/rRNA methyltransferase, putative [Medic...    59   3e-07
ref|NP_001239897.1| uncharacterized protein LOC100813874 [Glycin...    57   2e-06
ref|XP_002878523.1| tRNA/rRNA methyltransferase family protein [...    55   5e-06

>ref|XP_002313287.1| predicted protein [Populus trichocarpa] gi|222849695|gb|EEE87242.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/57 (63%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
 Frame = -1

Query: 165 SLPTPQQYSS--SRSEKGIVHSLPHGVGEAVNGASSHNKLLQVVLFSPQIPGNTGCI 1
           SLP  Q YS   S+S +G  +SLP GVG+ VN  S + KLLQVVL SPQIPGNTGCI
Sbjct: 42  SLPLSQCYSPFCSQSGRGNGNSLPDGVGKGVNEVSRNKKLLQVVLVSPQIPGNTGCI 98


>ref|XP_002513182.1| 23S rRNA methyltransferase, putative [Ricinus communis]
           gi|223547680|gb|EEF49173.1| 23S rRNA methyltransferase,
           putative [Ricinus communis]
          Length = 234

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/37 (83%), Positives = 33/37 (89%)
 Frame = -1

Query: 111 HSLPHGVGEAVNGASSHNKLLQVVLFSPQIPGNTGCI 1
           +SLPHGVGEAV+G S  NKLLQVVL SPQIPGNTGCI
Sbjct: 34  NSLPHGVGEAVSGVS-RNKLLQVVLVSPQIPGNTGCI 69


>ref|XP_003599101.1| tRNA/rRNA methyltransferase, putative [Medicago truncatula]
           gi|355488149|gb|AES69352.1| tRNA/rRNA methyltransferase,
           putative [Medicago truncatula]
          Length = 278

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 43/90 (47%), Positives = 48/90 (53%), Gaps = 21/90 (23%)
 Frame = -1

Query: 207 YHLCNKLSLCS-----------SATSLPTPQQYSSSRSEKGIVH----------SLPHGV 91
           YH  +KLSL             S +S P     SSS +  G V           SLP GV
Sbjct: 24  YHFRSKLSLFRQLHFKPTSPFPSISSPPHLLPLSSSLATNGSVAAENEISSKEGSLPQGV 83

Query: 90  GEAVNGASSHNKLLQVVLFSPQIPGNTGCI 1
           GE VN AS H+K+LQVVL SPQIPGNTGCI
Sbjct: 84  GEGVNQAS-HSKILQVVLVSPQIPGNTGCI 112


>ref|NP_001239897.1| uncharacterized protein LOC100813874 [Glycine max]
           gi|255638690|gb|ACU19650.1| unknown [Glycine max]
          Length = 260

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = -1

Query: 108 SLPHGVGEAVNGASSHNKLLQVVLFSPQIPGNTGCI 1
           +LP GVGEAVN ASS +K+LQVVL SPQIPGNTGCI
Sbjct: 60  TLPRGVGEAVNEASS-SKILQVVLVSPQIPGNTGCI 94


>ref|XP_002878523.1| tRNA/rRNA methyltransferase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297324361|gb|EFH54782.1| tRNA/rRNA
           methyltransferase family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 260

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/68 (52%), Positives = 41/68 (60%)
 Frame = -1

Query: 204 HLCNKLSLCSSATSLPTPQQYSSSRSEKGIVHSLPHGVGEAVNGASSHNKLLQVVLFSPQ 25
           HL  KLSL  S TS  +        S+KG  + LP G GE V    + +KLLQVVL SPQ
Sbjct: 33  HLKRKLSL--SITSFSSKIHSPLCESDKG--NPLPRGAGEGVK-EDARSKLLQVVLVSPQ 87

Query: 24  IPGNTGCI 1
           IPGNTGCI
Sbjct: 88  IPGNTGCI 95