BLASTX nr result

ID: Coptis21_contig00027028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027028
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15924.3| unnamed protein product [Vitis vinifera]               85   7e-15
ref|XP_002278694.1| PREDICTED: protein CHUP1, chloroplastic-like...    85   7e-15
ref|XP_002313983.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|XP_002521614.1| conserved hypothetical protein [Ricinus comm...    77   1e-12
ref|XP_003539335.1| PREDICTED: protein CHUP1, chloroplastic-like...    73   3e-11

>emb|CBI15924.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 36/67 (53%), Positives = 51/67 (76%)
 Frame = +2

Query: 8   MKRVANELQNKECSPKEDSMLQGARFAFRVHQFAGGFDTEAMNAFEELRKIGTGHQGDQQ 187
           MKR+  E+Q+ ECS +++ MLQG RFAFRVHQFAGGFD + M+AFEEL+++GTG    Q 
Sbjct: 257 MKRIIKEMQSIECSQEDNLMLQGVRFAFRVHQFAGGFDVDTMHAFEELKRVGTGSNKQQH 316

Query: 188 TIGSLAQ 208
            + ++ +
Sbjct: 317 AVNTIQE 323


>ref|XP_002278694.1| PREDICTED: protein CHUP1, chloroplastic-like [Vitis vinifera]
          Length = 433

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 36/67 (53%), Positives = 51/67 (76%)
 Frame = +2

Query: 8   MKRVANELQNKECSPKEDSMLQGARFAFRVHQFAGGFDTEAMNAFEELRKIGTGHQGDQQ 187
           MKR+  E+Q+ ECS +++ MLQG RFAFRVHQFAGGFD + M+AFEEL+++GTG    Q 
Sbjct: 366 MKRIIKEMQSIECSQEDNLMLQGVRFAFRVHQFAGGFDVDTMHAFEELKRVGTGSNKQQH 425

Query: 188 TIGSLAQ 208
            + ++ +
Sbjct: 426 AVNTIQE 432


>ref|XP_002313983.1| predicted protein [Populus trichocarpa] gi|222850391|gb|EEE87938.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/54 (64%), Positives = 44/54 (81%)
 Frame = +2

Query: 8   MKRVANELQNKECSPKEDSMLQGARFAFRVHQFAGGFDTEAMNAFEELRKIGTG 169
           +KR+  ELQ  ECS +E+ +LQGARFA+RVHQFAGGFD E  +AF+EL+KIG G
Sbjct: 331 LKRITKELQLNECSGEENLLLQGARFAYRVHQFAGGFDAETTHAFQELKKIGMG 384


>ref|XP_002521614.1| conserved hypothetical protein [Ricinus communis]
           gi|223539169|gb|EEF40763.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 326

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/55 (61%), Positives = 46/55 (83%)
 Frame = +2

Query: 2   QDMKRVANELQNKECSPKEDSMLQGARFAFRVHQFAGGFDTEAMNAFEELRKIGT 166
           Q +KR+  ELQ  +C  +E+ +LQGARFA+RVHQFAGGFDT+ +NAF+EL+K+GT
Sbjct: 267 QYIKRITKELQINDCLFEENLLLQGARFAYRVHQFAGGFDTDTINAFQELKKVGT 321


>ref|XP_003539335.1| PREDICTED: protein CHUP1, chloroplastic-like [Glycine max]
          Length = 494

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/53 (60%), Positives = 44/53 (83%)
 Frame = +2

Query: 8   MKRVANELQNKECSPKEDSMLQGARFAFRVHQFAGGFDTEAMNAFEELRKIGT 166
           MKRV  EL++ E S +++ ++QG RFAFRVHQFAGGFD+E + AF+EL+KIG+
Sbjct: 417 MKRVTKELESNEVSKEDNLLVQGVRFAFRVHQFAGGFDSETIQAFQELKKIGS 469


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