BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027020
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat...    77   1e-12
ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat...    75   7e-12
emb|CBI30347.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat...    74   2e-11
ref|XP_002309408.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11

>ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Glycine max]
          Length = 566

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/87 (40%), Positives = 55/87 (63%)
 Frame = -2

Query: 263 FIINQFISQCYNIFSNIKYATSVFERVNVPNVYLWNNVLKAHCDKSSVFDTILLFKCFKS 84
           F++  FIS+ + + S + YA+SVF RV  P+  LWN ++K+HC K+    T+  F   K+
Sbjct: 62  FLVFLFISRAHTLLSTLSYASSVFHRVLAPSTVLWNTLIKSHCQKNLFSHTLSAFARMKA 121

Query: 83  SVNALPDNYTFPSLIKVCANDLALRDG 3
              ALPD++T+PS+IK C+     R+G
Sbjct: 122 H-GALPDSFTYPSVIKACSGTCKAREG 147


>ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
           gi|449519310|ref|XP_004166678.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
          Length = 565

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/87 (43%), Positives = 56/87 (64%)
 Frame = -2

Query: 263 FIINQFISQCYNIFSNIKYATSVFERVNVPNVYLWNNVLKAHCDKSSVFDTILLFKCFKS 84
           F++ QFIS   N  ++I Y+TSVF+RV  P+ +LWN+++  +C K    D I L+   K 
Sbjct: 62  FLVTQFISAS-NSVAHISYSTSVFDRVLSPSTFLWNSLVSGYCAKLQFVDIISLYVRMKR 120

Query: 83  SVNALPDNYTFPSLIKVCANDLALRDG 3
              A PD YTFPSL+KVCA++  + +G
Sbjct: 121 EDGA-PDRYTFPSLLKVCASEGKMMEG 146


>emb|CBI30347.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/87 (43%), Positives = 55/87 (63%)
 Frame = -2

Query: 263 FIINQFISQCYNIFSNIKYATSVFERVNVPNVYLWNNVLKAHCDKSSVFDTILLFKCFKS 84
           FII+QF++ C N  SN  Y TSVF  V+ P+  LWN  +K + +  SV  T+ LF   K 
Sbjct: 106 FIISQFLTLC-NSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKR 164

Query: 83  SVNALPDNYTFPSLIKVCANDLALRDG 3
           S +A+PD +T+PSLIK C+    +++G
Sbjct: 165 S-DAVPDKFTYPSLIKACSKVCGVKEG 190


>ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/87 (43%), Positives = 55/87 (63%)
 Frame = -2

Query: 263 FIINQFISQCYNIFSNIKYATSVFERVNVPNVYLWNNVLKAHCDKSSVFDTILLFKCFKS 84
           FII+QF++ C N  SN  Y TSVF  V+ P+  LWN  +K + +  SV  T+ LF   K 
Sbjct: 58  FIISQFLTLC-NSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKR 116

Query: 83  SVNALPDNYTFPSLIKVCANDLALRDG 3
           S +A+PD +T+PSLIK C+    +++G
Sbjct: 117 S-DAVPDKFTYPSLIKACSKVCGVKEG 142


>ref|XP_002309408.1| predicted protein [Populus trichocarpa] gi|222855384|gb|EEE92931.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/87 (43%), Positives = 55/87 (63%)
 Frame = -2

Query: 263 FIINQFISQCYNIFSNIKYATSVFERVNVPNVYLWNNVLKAHCDKSSVFDTILLFKCFKS 84
           FII+ F+S    I +++ Y+TS+F R+  P+ +L+N +LK     S   DT  LF   K 
Sbjct: 42  FIISHFLS----ISTSVSYSTSIFNRLLNPSTFLYNILLKIFSKNSQFIDTFSLFYRMKQ 97

Query: 83  SVNALPDNYTFPSLIKVCANDLALRDG 3
           S  AL D YT+P LIKVC+N+L L++G
Sbjct: 98  SEYALSDKYTYPLLIKVCSNELRLKEG 124