BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027004
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ40865.1| bHLH transcriptional factor [Coptis japonica]          58   9e-07

>dbj|BAJ40865.1| bHLH transcriptional factor [Coptis japonica]
          Length = 228

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/67 (49%), Positives = 44/67 (65%)
 Frame = -3

Query: 203 SAHLSTWSKLRRLQLKCAIF*LEISNSSAGCDIRVPPQPSLYVVIQVRGNRVTVSLTDT* 24
           S  LST  KL    ++ +      S++S  CDIRV P+PS  V I+VRG+RV VSLTDT 
Sbjct: 88  STPLSTRPKLASPSIQVSDRKSSGSSNSTDCDIRVAPEPSASVAIRVRGDRVNVSLTDTK 147

Query: 23  GTSQTIV 3
           GT+QT++
Sbjct: 148 GTAQTLL 154