BLASTX nr result
ID: Coptis21_contig00027003
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00027003
(331 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_005296142.1| rpl23 gene product (chloroplast) [Pentactina... 176 2e-42
gb|AEK71432.1| ribosomal protein L23 [Carica papaya] 173 1e-41
ref|YP_817525.1| ribosomal protein L23 [Coffea arabica] gi|11661... 173 1e-41
ref|YP_740693.1| ribosomal protein L23 [Nandina domestica] gi|11... 172 2e-41
ref|YP_001004227.1| ribosomal protein L23 [Ranunculus macranthus... 172 3e-41
>ref|YP_005296142.1| rpl23 gene product (chloroplast) [Pentactina rupicola]
gi|377829934|ref|YP_005296161.1| rpl23 gene product
(chloroplast) [Pentactina rupicola]
gi|340806942|gb|AEK71570.1| ribosomal protein L23
[Spiraea tomentosa] gi|371532663|gb|AEX31773.1|
ribosomal protein L23 (chloroplast) [Pentactina
rupicola] gi|371532682|gb|AEX31792.1| ribosomal protein
L23 (chloroplast) [Pentactina rupicola]
Length = 93
Score = 176 bits (445), Expect = 2e-42
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +2
Query: 77 MDGIKYAVFTDKSIRLLGNNQYTFNVESGLTRTEIKHWVELFFGVKVIAMNSHRLPGKGR 256
MDGIKYAVFTDKSIRLLG NQYTFNVESGLTRTEIKHWVELFFGVKVIAMNSHRLPGKGR
Sbjct: 1 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTRTEIKHWVELFFGVKVIAMNSHRLPGKGR 60
Query: 257 RMGPIMGHTMHYRRMIITLQPGYSI 331
RMGPIMGHTMHYRRMIITLQPGYSI
Sbjct: 61 RMGPIMGHTMHYRRMIITLQPGYSI 85
>gb|AEK71432.1| ribosomal protein L23 [Carica papaya]
Length = 93
Score = 173 bits (439), Expect = 1e-41
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = +2
Query: 77 MDGIKYAVFTDKSIRLLGNNQYTFNVESGLTRTEIKHWVELFFGVKVIAMNSHRLPGKGR 256
MDGIKYAVFTDKSIRLLG NQYTFNVESGLTRTEIKHWVELFFGVKVIAMNSHRLPGK R
Sbjct: 1 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTRTEIKHWVELFFGVKVIAMNSHRLPGKSR 60
Query: 257 RMGPIMGHTMHYRRMIITLQPGYSI 331
RMGPIMGHTMHYRRMIITLQPGYSI
Sbjct: 61 RMGPIMGHTMHYRRMIITLQPGYSI 85
>ref|YP_817525.1| ribosomal protein L23 [Coffea arabica]
gi|116617171|ref|YP_817544.1| ribosomal protein L23
[Coffea arabica] gi|122153662|sp|A0A378.1|RK23_COFAR
RecName: Full=50S ribosomal protein L23, chloroplastic
gi|116242206|gb|ABJ89721.1| ribosomal protein L23
[Coffea arabica] gi|116242227|gb|ABJ89742.1| ribosomal
protein L23 [Coffea arabica] gi|340806845|gb|AEK71486.1|
ribosomal protein L23 [Ixerba brexioides]
gi|340806881|gb|AEK71517.1| ribosomal protein L23
[Melianthus comosus]
Length = 93
Score = 173 bits (439), Expect = 1e-41
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = +2
Query: 77 MDGIKYAVFTDKSIRLLGNNQYTFNVESGLTRTEIKHWVELFFGVKVIAMNSHRLPGKGR 256
MDGIKYAVFTDKSIRLLG NQYTFNVESG TRTEIKHWVELFFGVKVIAMNSHRLPGKGR
Sbjct: 1 MDGIKYAVFTDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGR 60
Query: 257 RMGPIMGHTMHYRRMIITLQPGYSI 331
RMGPIMGHTMHYRRMIITLQPGYSI
Sbjct: 61 RMGPIMGHTMHYRRMIITLQPGYSI 85
>ref|YP_740693.1| ribosomal protein L23 [Nandina domestica]
gi|114330033|ref|YP_740714.1| ribosomal protein L23
[Nandina domestica] gi|229577797|ref|YP_002836133.1|
ribosomal protein L23 [Megaleranthis saniculifolia]
gi|229577816|ref|YP_002836152.1| ribosomal protein L23
[Megaleranthis saniculifolia]
gi|334361993|ref|YP_004563910.1| ribosomal protein L23
[Nelumbo lutea] gi|334362012|ref|YP_004563929.1|
ribosomal protein L23 [Nelumbo lutea]
gi|334362093|ref|YP_004564146.1| ribosomal protein L23
[Nelumbo nucifera] gi|334362112|ref|YP_004564165.1|
ribosomal protein L23 [Nelumbo nucifera]
gi|122165905|sp|Q09FP7.1|RK23_NANDO RecName: Full=50S
ribosomal protein L23, chloroplastic
gi|114054514|gb|ABI49907.1| ribosomal protein L23
[Nandina domestica] gi|114054535|gb|ABI49928.1|
ribosomal protein L23 [Nandina domestica]
gi|224474178|gb|ACN49367.1| ribosomal protein L23
[Nelumbo lutea] gi|224474197|gb|ACN49386.1| ribosomal
protein L23 [Nelumbo lutea] gi|224474266|gb|ACN49452.1|
ribosomal protein L23 [Nelumbo nucifera]
gi|224474285|gb|ACN49471.1| ribosomal protein L23
[Nelumbo nucifera] gi|226933925|gb|ACO92058.1| ribosomal
protein L23 [Megaleranthis saniculifolia]
gi|226933944|gb|ACO92077.1| ribosomal protein L23
[Megaleranthis saniculifolia]
gi|290487736|gb|ADD30252.1| ribosomal protein L23
[Nelumbo nucifera] gi|340807029|gb|AEK71645.1| ribosomal
protein L23 [Nelumbo nucifera]
gi|383286840|gb|AFH01490.1| ribosomal protein L23
(chloroplast) [Nelumbo nucifera]
gi|383286863|gb|AFH01513.1| ribosomal protein L23
(chloroplast) [Nelumbo nucifera]
gi|383286934|gb|AFH01583.1| ribosomal protein L23
(chloroplast) [Nelumbo lutea]
gi|383286952|gb|AFH01601.1| ribosomal protein L23
(chloroplast) [Nelumbo lutea]
Length = 93
Score = 172 bits (437), Expect = 2e-41
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = +2
Query: 77 MDGIKYAVFTDKSIRLLGNNQYTFNVESGLTRTEIKHWVELFFGVKVIAMNSHRLPGKGR 256
MDGIKYAVFTDKSIRLLGNNQYT NVESG TRTEIKHWVELFFGVKVIAMNSHRLPGKGR
Sbjct: 1 MDGIKYAVFTDKSIRLLGNNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGR 60
Query: 257 RMGPIMGHTMHYRRMIITLQPGYSI 331
RMGPIMGHTMHYRRMIITLQPGYSI
Sbjct: 61 RMGPIMGHTMHYRRMIITLQPGYSI 85
>ref|YP_001004227.1| ribosomal protein L23 [Ranunculus macranthus]
gi|122894050|ref|YP_001004246.1| ribosomal protein L23
[Ranunculus macranthus] gi|85540845|gb|ABC70797.1|
ribosomal protein L23 [Ranunculus macranthus]
gi|85540864|gb|ABC70816.1| ribosomal protein L23
[Ranunculus macranthus]
Length = 93
Score = 172 bits (435), Expect = 3e-41
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +2
Query: 77 MDGIKYAVFTDKSIRLLGNNQYTFNVESGLTRTEIKHWVELFFGVKVIAMNSHRLPGKGR 256
MDGIKYAVFTDKSIRLLGNNQYT NVESG TRTEIKHWVELFFGVKV+AMNSHRLPGKGR
Sbjct: 1 MDGIKYAVFTDKSIRLLGNNQYTSNVESGSTRTEIKHWVELFFGVKVLAMNSHRLPGKGR 60
Query: 257 RMGPIMGHTMHYRRMIITLQPGYSI 331
RMGPIMGHTMHYRRMIITLQPGYSI
Sbjct: 61 RMGPIMGHTMHYRRMIITLQPGYSI 85