BLASTX nr result

ID: Coptis21_contig00026975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026975
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN84143.1| hypothetical protein VITISV_008303 [Vitis vinifera]    78   1e-12
emb|CBI29273.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_002272176.1| PREDICTED: probable peptide/nitrate transpor...    77   2e-12
emb|CAN78165.1| hypothetical protein VITISV_040927 [Vitis vinifera]    77   2e-12
ref|XP_002297883.1| predicted protein [Populus trichocarpa] gi|2...    76   5e-12

>emb|CAN84143.1| hypothetical protein VITISV_008303 [Vitis vinifera]
          Length = 626

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 38/52 (73%), Positives = 42/52 (80%)
 Frame = -1

Query: 244 IGNEMAERMAYFGLSVNMVAFMFYIMHQPFSSSANAVNTSWGYHKLHLFLVG 89
           +GNEMAERMAYFGLSVNMVAFMFY+MH+PFSSSANAVN   G  +    L G
Sbjct: 72  LGNEMAERMAYFGLSVNMVAFMFYVMHRPFSSSANAVNNFLGISQASSVLGG 123



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
 Frame = -2

Query: 183 SCSTLCINHFLVLQMR*TLLGDITSFICSWWVLADAYLGRYWT*-LFHTIYLAGLTGITL 7
           S S   +N+FL +    ++LG           LADAYLGRYWT  +F TIYLAGLTGITL
Sbjct: 102 SSSANAVNNFLGISQASSVLGGF---------LADAYLGRYWTIAIFTTIYLAGLTGITL 152

Query: 6   CA 1
           CA
Sbjct: 153 CA 154


>emb|CBI29273.3| unnamed protein product [Vitis vinifera]
          Length = 606

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 38/51 (74%), Positives = 41/51 (80%)
 Frame = -1

Query: 241 GNEMAERMAYFGLSVNMVAFMFYIMHQPFSSSANAVNTSWGYHKLHLFLVG 89
           GNEMAERMAYFGLSVNMVAFMFY+MH+PFSSSANAVN   G  +    L G
Sbjct: 80  GNEMAERMAYFGLSVNMVAFMFYVMHRPFSSSANAVNNFLGISQASSVLGG 130



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
 Frame = -2

Query: 183 SCSTLCINHFLVLQMR*TLLGDITSFICSWWVLADAYLGRYWT*-LFHTIYLAGLTGITL 7
           S S   +N+FL +    ++LG           LADAYLGRYWT  +F TIYLAGLTGITL
Sbjct: 109 SSSANAVNNFLGISQASSVLGGF---------LADAYLGRYWTIAIFTTIYLAGLTGITL 159

Query: 6   CA 1
           CA
Sbjct: 160 CA 161


>ref|XP_002272176.1| PREDICTED: probable peptide/nitrate transporter At5g13400 [Vitis
           vinifera]
          Length = 640

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 38/51 (74%), Positives = 41/51 (80%)
 Frame = -1

Query: 241 GNEMAERMAYFGLSVNMVAFMFYIMHQPFSSSANAVNTSWGYHKLHLFLVG 89
           GNEMAERMAYFGLSVNMVAFMFY+MH+PFSSSANAVN   G  +    L G
Sbjct: 80  GNEMAERMAYFGLSVNMVAFMFYVMHRPFSSSANAVNNFLGISQASSVLGG 130



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
 Frame = -2

Query: 183 SCSTLCINHFLVLQMR*TLLGDITSFICSWWVLADAYLGRYWT*-LFHTIYLAGLTGITL 7
           S S   +N+FL +    ++LG           LADAYLGRYWT  +F TIYLAGLTGITL
Sbjct: 109 SSSANAVNNFLGISQASSVLGGF---------LADAYLGRYWTIAIFTTIYLAGLTGITL 159

Query: 6   CA 1
           CA
Sbjct: 160 CA 161


>emb|CAN78165.1| hypothetical protein VITISV_040927 [Vitis vinifera]
          Length = 612

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 38/51 (74%), Positives = 41/51 (80%)
 Frame = -1

Query: 241 GNEMAERMAYFGLSVNMVAFMFYIMHQPFSSSANAVNTSWGYHKLHLFLVG 89
           GNEMAERMAYFGLSVNMVAFMFY+MH+PFSSSANAVN   G  +    L G
Sbjct: 80  GNEMAERMAYFGLSVNMVAFMFYVMHRPFSSSANAVNNFLGISQASSVLGG 130



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
 Frame = -2

Query: 183 SCSTLCINHFLVLQMR*TLLGDITSFICSWWVLADAYLGRYWT*-LFHTIYLAGLTGITL 7
           S S   +N+FL +    ++LG           LADAYLGRYWT  +F TIYLAGLTGITL
Sbjct: 109 SSSANAVNNFLGISQASSVLGGF---------LADAYLGRYWTIAIFTTIYLAGLTGITL 159

Query: 6   CA 1
           CA
Sbjct: 160 CA 161


>ref|XP_002297883.1| predicted protein [Populus trichocarpa] gi|222845141|gb|EEE82688.1|
           predicted protein [Populus trichocarpa]
          Length = 638

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 37/51 (72%), Positives = 42/51 (82%)
 Frame = -1

Query: 241 GNEMAERMAYFGLSVNMVAFMFYIMHQPFSSSANAVNTSWGYHKLHLFLVG 89
           GNEMAERMAYFGLSVNMVAFMFYIMH+PF+SS+NAVN   G  ++   L G
Sbjct: 80  GNEMAERMAYFGLSVNMVAFMFYIMHRPFTSSSNAVNNFLGISQVSSVLGG 130


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