BLASTX nr result

ID: Coptis21_contig00026904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026904
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago trunc...   127   3e-27
ref|XP_002531224.1| DNA repair endonuclease xp-f / mei-9 / rad1,...   126   4e-27
gb|AFW66582.1| hypothetical protein ZEAMMB73_828091 [Zea mays]        125   6e-27
gb|AFW66578.1| hypothetical protein ZEAMMB73_828091 [Zea mays]        125   6e-27
ref|XP_003539104.1| PREDICTED: DNA repair endonuclease UVH1-like...   125   6e-27

>ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago truncatula]
            gi|355512726|gb|AES94349.1| DNA repair endonuclease UVH1
            [Medicago truncatula]
          Length = 984

 Score =  127 bits (318), Expect = 3e-27
 Identities = 59/70 (84%), Positives = 68/70 (97%)
 Frame = -1

Query: 670  RSENYNTSAIEFLRRLPGVTDSNYRALMDGCTSLAELAVLPVERLADLMGGQRAARTLRD 491
            R+ENYNTSA+EFLRRLPGVTDSNYRA+MDGC SLAELA+LPVE+LA++MGG +AARTLRD
Sbjct: 915  RAENYNTSAVEFLRRLPGVTDSNYRAIMDGCKSLAELALLPVEKLAEIMGGHKAARTLRD 974

Query: 490  FLDAKYPTLM 461
            FLDAKYPTL+
Sbjct: 975  FLDAKYPTLL 984


>ref|XP_002531224.1| DNA repair endonuclease xp-f / mei-9 / rad1, putative [Ricinus
            communis] gi|223529184|gb|EEF31160.1| DNA repair
            endonuclease xp-f / mei-9 / rad1, putative [Ricinus
            communis]
          Length = 887

 Score =  126 bits (316), Expect = 4e-27
 Identities = 59/70 (84%), Positives = 67/70 (95%)
 Frame = -1

Query: 670  RSENYNTSAIEFLRRLPGVTDSNYRALMDGCTSLAELAVLPVERLADLMGGQRAARTLRD 491
            R+ENYNTSA+EFLRRLPGVTDSNYRA+MDGC SLAELA+LP+ERL +LMGGQ+AARTLRD
Sbjct: 818  RAENYNTSAVEFLRRLPGVTDSNYRAIMDGCKSLAELALLPMERLTELMGGQKAARTLRD 877

Query: 490  FLDAKYPTLM 461
            FLDAKYP L+
Sbjct: 878  FLDAKYPALL 887


>gb|AFW66582.1| hypothetical protein ZEAMMB73_828091 [Zea mays]
          Length = 986

 Score =  125 bits (315), Expect = 6e-27
 Identities = 60/70 (85%), Positives = 68/70 (97%)
 Frame = -1

Query: 670  RSENYNTSAIEFLRRLPGVTDSNYRALMDGCTSLAELAVLPVERLADLMGGQRAARTLRD 491
            RSENYNTSAIEFLRRLPGVTDSNYRA+MDGC SLAELA+LPVERLA+LMGGQ+AARTL++
Sbjct: 917  RSENYNTSAIEFLRRLPGVTDSNYRAIMDGCNSLAELALLPVERLAELMGGQKAARTLKE 976

Query: 490  FLDAKYPTLM 461
            FLDAK PT++
Sbjct: 977  FLDAKCPTML 986


>gb|AFW66578.1| hypothetical protein ZEAMMB73_828091 [Zea mays]
          Length = 176

 Score =  125 bits (315), Expect = 6e-27
 Identities = 60/70 (85%), Positives = 68/70 (97%)
 Frame = -1

Query: 670 RSENYNTSAIEFLRRLPGVTDSNYRALMDGCTSLAELAVLPVERLADLMGGQRAARTLRD 491
           RSENYNTSAIEFLRRLPGVTDSNYRA+MDGC SLAELA+LPVERLA+LMGGQ+AARTL++
Sbjct: 107 RSENYNTSAIEFLRRLPGVTDSNYRAIMDGCNSLAELALLPVERLAELMGGQKAARTLKE 166

Query: 490 FLDAKYPTLM 461
           FLDAK PT++
Sbjct: 167 FLDAKCPTML 176


>ref|XP_003539104.1| PREDICTED: DNA repair endonuclease UVH1-like [Glycine max]
          Length = 967

 Score =  125 bits (315), Expect = 6e-27
 Identities = 59/70 (84%), Positives = 67/70 (95%)
 Frame = -1

Query: 670  RSENYNTSAIEFLRRLPGVTDSNYRALMDGCTSLAELAVLPVERLADLMGGQRAARTLRD 491
            R+ENYNTSA+EFLRR PGVTDSNYRA+MDGC SLAELA+LPVE+LA+LMGG +AARTLRD
Sbjct: 898  RAENYNTSAVEFLRRCPGVTDSNYRAIMDGCKSLAELALLPVEKLAELMGGHKAARTLRD 957

Query: 490  FLDAKYPTLM 461
            FLDAKYPTL+
Sbjct: 958  FLDAKYPTLL 967


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