BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026845
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containi...   222   3e-56
emb|CBI15839.3| unnamed protein product [Vitis vinifera]              222   3e-56
ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat...   158   5e-37
emb|CBI24015.3| unnamed protein product [Vitis vinifera]              157   8e-37
ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containi...   157   8e-37

>ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  222 bits (565), Expect = 3e-56
 Identities = 111/180 (61%), Positives = 137/180 (76%), Gaps = 21/180 (11%)
 Frame = +3

Query: 18  SGRHYFSQMLPVYG----IEHYGCMVDLLGRAGFLEEAL-------------VSGSLLHA 146
           +G+ YFS+ML VYG    +EHYGCMVDLLGRAG+L+EAL             V GSLL A
Sbjct: 324 AGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRA 383

Query: 147 CRVHKDTKLSEQ----LLELDPHDGGNYVFSSNFYASVNRWHDVEICRKLMVEKGVQKTP 314
           C++HKDTKL EQ    LLELDP DGGNYVF SN YAS++RW DV  CRKLM+++GV KTP
Sbjct: 384 CQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTP 443

Query: 315 GCCSIEVDNVVHEFFAGDSSHPKFTQISKFLDDIDIKLRGIGHQPDMSYVLHDVDVEEKQ 494
           GC SIEV+N+VHEF AGD+SHP+FTQI+ FLD+I  +L+G GH P+ + VLHD++ EEK+
Sbjct: 444 GCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKE 503


>emb|CBI15839.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  222 bits (565), Expect = 3e-56
 Identities = 111/180 (61%), Positives = 137/180 (76%), Gaps = 21/180 (11%)
 Frame = +3

Query: 18  SGRHYFSQMLPVYG----IEHYGCMVDLLGRAGFLEEAL-------------VSGSLLHA 146
           +G+ YFS+ML VYG    +EHYGCMVDLLGRAG+L+EAL             V GSLL A
Sbjct: 252 AGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRA 311

Query: 147 CRVHKDTKLSEQ----LLELDPHDGGNYVFSSNFYASVNRWHDVEICRKLMVEKGVQKTP 314
           C++HKDTKL EQ    LLELDP DGGNYVF SN YAS++RW DV  CRKLM+++GV KTP
Sbjct: 312 CQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTP 371

Query: 315 GCCSIEVDNVVHEFFAGDSSHPKFTQISKFLDDIDIKLRGIGHQPDMSYVLHDVDVEEKQ 494
           GC SIEV+N+VHEF AGD+SHP+FTQI+ FLD+I  +L+G GH P+ + VLHD++ EEK+
Sbjct: 372 GCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKE 431


>ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g15930 [Vitis vinifera]
          Length = 724

 Score =  158 bits (399), Expect = 5e-37
 Identities = 83/180 (46%), Positives = 115/180 (63%), Gaps = 21/180 (11%)
 Frame = +3

Query: 21   GRHYFSQMLPVYGIE----HYGCMVDLLGRAGFLEEA-------------LVSGSLLHAC 149
            G+ +F++M   +GIE    HYGCMVDLLGRAG L+EA             +V GSLL AC
Sbjct: 472  GKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGAC 531

Query: 150  RVHKDTKLSE----QLLELDPHDGGNYVFSSNFYASVNRWHDVEICRKLMVEKGVQKTPG 317
            RVH+D +++E    Q+LEL+P +G  YV   N YA+ NRW  +   RKLM+++G++KTPG
Sbjct: 532  RVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPG 591

Query: 318  CCSIEVDNVVHEFFAGDSSHPKFTQISKFLDDIDIKLRGIGHQPDMSYVLHDVDVEEKQS 497
            C  IE++  VHEF AGD  HP+  +I   LD++ + L+  G+ PD S V  D+  EEK+S
Sbjct: 592  CSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKES 651


>emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  157 bits (397), Expect = 8e-37
 Identities = 85/180 (47%), Positives = 112/180 (62%), Gaps = 21/180 (11%)
 Frame = +3

Query: 21  GRHYFSQMLPVYGI----EHYGCMVDLLGRAGFLEEAL-------------VSGSLLHAC 149
           G+HYF  M  V G+    EH+GCMVDLLGRAG LEEA              V G+L+ AC
Sbjct: 317 GKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGAC 376

Query: 150 RVHKDTKLSEQL----LELDPHDGGNYVFSSNFYASVNRWHDVEICRKLMVEKGVQKTPG 317
           R+H +T+L EQ+    +EL+PH+ G YV  +N YAS  RW DV   RKLM ++GV+K PG
Sbjct: 377 RIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPG 436

Query: 318 CCSIEVDNVVHEFFAGDSSHPKFTQISKFLDDIDIKLRGIGHQPDMSYVLHDVDVEEKQS 497
              IE ++ V EF AG  +HP+  +I   LD+I   +R IG+ PD   VLHD+D EEK++
Sbjct: 437 FSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKEN 496


>ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  157 bits (397), Expect = 8e-37
 Identities = 85/180 (47%), Positives = 112/180 (62%), Gaps = 21/180 (11%)
 Frame = +3

Query: 21  GRHYFSQMLPVYGI----EHYGCMVDLLGRAGFLEEAL-------------VSGSLLHAC 149
           G+HYF  M  V G+    EH+GCMVDLLGRAG LEEA              V G+L+ AC
Sbjct: 372 GKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGAC 431

Query: 150 RVHKDTKLSEQL----LELDPHDGGNYVFSSNFYASVNRWHDVEICRKLMVEKGVQKTPG 317
           R+H +T+L EQ+    +EL+PH+ G YV  +N YAS  RW DV   RKLM ++GV+K PG
Sbjct: 432 RIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPG 491

Query: 318 CCSIEVDNVVHEFFAGDSSHPKFTQISKFLDDIDIKLRGIGHQPDMSYVLHDVDVEEKQS 497
              IE ++ V EF AG  +HP+  +I   LD+I   +R IG+ PD   VLHD+D EEK++
Sbjct: 492 FSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKEN 551