BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026842
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309609.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containi...    61   8e-08
emb|CBI21003.3| unnamed protein product [Vitis vinifera]               61   8e-08

>ref|XP_002309609.1| predicted protein [Populus trichocarpa] gi|222855585|gb|EEE93132.1|
           predicted protein [Populus trichocarpa]
          Length = 841

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
 Frame = -3

Query: 254 SLCTTPTISSQNPSIPNTPFSKDQIS-----NTPFSQFSA-TPLNSVVTQDHVIETLLSQ 93
           S+ +  T+SSQ P +PN P S+  +S     NT F   SA T  +S +TQ   I+TLL+ 
Sbjct: 16  SIKSPKTLSSQ-PELPNIPISETPLSQNPHPNTNFPGKSAPTSQDSFLTQTQYIDTLLNH 74

Query: 92  QNDPSGALHYFQWAEKQRGFVNSVDVFCIL 3
           QNDP  AL YF WA ++RG + SVD  C+L
Sbjct: 75  QNDPQSALSYFTWASQKRGLIKSVDALCVL 104


>ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/73 (43%), Positives = 43/73 (58%)
 Frame = -3

Query: 221 NPSIPNTPFSKDQISNTPFSQFSATPLNSVVTQDHVIETLLSQQNDPSGALHYFQWAEKQ 42
           N S P   +S+D +  +   Q   TPL+    Q+HVI+ LL   NDP  AL YF+ AE Q
Sbjct: 73  NSSSPYPRYSQDTVPTSQIHQ-ETTPLS----QNHVIDALLCHVNDPQSALRYFKRAETQ 127

Query: 41  RGFVNSVDVFCIL 3
           RGF+  VD +C+L
Sbjct: 128 RGFIRGVDAYCVL 140


>emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/73 (43%), Positives = 43/73 (58%)
 Frame = -3

Query: 221 NPSIPNTPFSKDQISNTPFSQFSATPLNSVVTQDHVIETLLSQQNDPSGALHYFQWAEKQ 42
           N S P   +S+D +  +   Q   TPL+    Q+HVI+ LL   NDP  AL YF+ AE Q
Sbjct: 33  NSSSPYPRYSQDTVPTSQIHQ-ETTPLS----QNHVIDALLCHVNDPQSALRYFKRAETQ 87

Query: 41  RGFVNSVDVFCIL 3
           RGF+  VD +C+L
Sbjct: 88  RGFIRGVDAYCVL 100