BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026785
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26264.3| unnamed protein product [Vitis vinifera]              248   4e-64
ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containi...   248   4e-64
ref|XP_002314694.1| predicted protein [Populus trichocarpa] gi|2...   246   2e-63
ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containi...   235   3e-60
ref|XP_003617141.1| Pentatricopeptide repeat-containing protein ...   233   1e-59

>emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  248 bits (634), Expect = 4e-64
 Identities = 122/152 (80%), Positives = 130/152 (85%)
 Frame = -2

Query: 571 EATDVRTEMKDVGIKKGPGCSWITVKNDVHVFQAKDTSHERNSEIQAMLAKLRRDMKAAG 392
           EAT VR EMKDVGIKKG GCSWIT  N VHVFQAKDTSHERNSEIQAMLAKLR +M+AAG
Sbjct: 432 EATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAG 491

Query: 391 YIPHTNFALYDLXXXXXXXEVWYHSEKLALAFGLISIPPGVPIRITKNLRVCIDCHSALK 212
           YIP T+FAL+DL       EVWYHSEK+ALAFGLISIP GVPIRITKNLR+C DCHSA+K
Sbjct: 492 YIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIK 551

Query: 211 FISSIVNREIIVRDNNRFHRFKDNLCSCGDYW 116
           FIS IV REIIVRDNN FHRF+DN CSC DYW
Sbjct: 552 FISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 583


>ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  248 bits (634), Expect = 4e-64
 Identities = 122/152 (80%), Positives = 130/152 (85%)
 Frame = -2

Query: 571 EATDVRTEMKDVGIKKGPGCSWITVKNDVHVFQAKDTSHERNSEIQAMLAKLRRDMKAAG 392
           EAT VR EMKDVGIKKG GCSWIT  N VHVFQAKDTSHERNSEIQAMLAKLR +M+AAG
Sbjct: 533 EATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAG 592

Query: 391 YIPHTNFALYDLXXXXXXXEVWYHSEKLALAFGLISIPPGVPIRITKNLRVCIDCHSALK 212
           YIP T+FAL+DL       EVWYHSEK+ALAFGLISIP GVPIRITKNLR+C DCHSA+K
Sbjct: 593 YIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIK 652

Query: 211 FISSIVNREIIVRDNNRFHRFKDNLCSCGDYW 116
           FIS IV REIIVRDNN FHRF+DN CSC DYW
Sbjct: 653 FISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684


>ref|XP_002314694.1| predicted protein [Populus trichocarpa] gi|222863734|gb|EEF00865.1|
           predicted protein [Populus trichocarpa]
          Length = 631

 Score =  246 bits (627), Expect = 2e-63
 Identities = 118/152 (77%), Positives = 130/152 (85%)
 Frame = -2

Query: 571 EATDVRTEMKDVGIKKGPGCSWITVKNDVHVFQAKDTSHERNSEIQAMLAKLRRDMKAAG 392
           EAT VR EMKDVGIKKG GCSW+T KN VHVFQAKDTSHERNSEIQAML KLR +M+AAG
Sbjct: 480 EATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAAG 539

Query: 391 YIPHTNFALYDLXXXXXXXEVWYHSEKLALAFGLISIPPGVPIRITKNLRVCIDCHSALK 212
           Y+P TN+ALYDL       EV YHSEK+ALAFGLI++PPGVPIRITKNLR+C DCHSA K
Sbjct: 540 YMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAFK 599

Query: 211 FISSIVNREIIVRDNNRFHRFKDNLCSCGDYW 116
           FIS IV REIIVRDNNRFHRF+D+ CSC D+W
Sbjct: 600 FISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631


>ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  235 bits (600), Expect = 3e-60
 Identities = 112/152 (73%), Positives = 126/152 (82%)
 Frame = -2

Query: 571 EATDVRTEMKDVGIKKGPGCSWITVKNDVHVFQAKDTSHERNSEIQAMLAKLRRDMKAAG 392
           EAT VR EM+D+GIKK  G SW+ VKN VHVFQAKD+ HE+NSEIQAMLAKLR +MK AG
Sbjct: 535 EATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAG 594

Query: 391 YIPHTNFALYDLXXXXXXXEVWYHSEKLALAFGLISIPPGVPIRITKNLRVCIDCHSALK 212
           Y+P  N +L+DL       EVWYHSEK+ALAFGLI++P GVPIRITKNLR+CIDCHSA+K
Sbjct: 595 YVPDANLSLFDLEEEEKASEVWYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIK 654

Query: 211 FISSIVNREIIVRDNNRFHRFKDNLCSCGDYW 116
           FIS IV REIIVRDNNRFHRFKD  CSC DYW
Sbjct: 655 FISKIVGREIIVRDNNRFHRFKDGWCSCKDYW 686


>ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518476|gb|AET00100.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  233 bits (595), Expect = 1e-59
 Identities = 112/152 (73%), Positives = 125/152 (82%)
 Frame = -2

Query: 571 EATDVRTEMKDVGIKKGPGCSWITVKNDVHVFQAKDTSHERNSEIQAMLAKLRRDMKAAG 392
           EAT VR EMKD+GIKK  G SWI VKN +HVFQAKD+SH+RNSEIQAML KLR  MK AG
Sbjct: 533 EATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAG 592

Query: 391 YIPHTNFALYDLXXXXXXXEVWYHSEKLALAFGLISIPPGVPIRITKNLRVCIDCHSALK 212
           Y+P TN +L+DL       EVWYHSEK+ALAFGLI++P GVPIRITKNLR+C DCHSA+K
Sbjct: 593 YVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIK 652

Query: 211 FISSIVNREIIVRDNNRFHRFKDNLCSCGDYW 116
           FIS IV REIIVRDN+RFHRFKD  CSC DYW
Sbjct: 653 FISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 684