BLASTX nr result

ID: Coptis21_contig00026783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026783
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611303.1| hypothetical protein MTR_5g012510 [Medicago ...    63   6e-08
ref|XP_003605010.1| hypothetical protein MTR_4g022820 [Medicago ...    63   7e-08
ref|XP_002521049.1| DNA binding protein, putative [Ricinus commu...    61   3e-07
ref|XP_003530634.1| PREDICTED: uncharacterized protein LOC100794...    56   7e-06
ref|XP_002329731.1| predicted protein [Populus trichocarpa] gi|2...    56   9e-06

>ref|XP_003611303.1| hypothetical protein MTR_5g012510 [Medicago truncatula]
           gi|355512638|gb|AES94261.1| hypothetical protein
           MTR_5g012510 [Medicago truncatula]
          Length = 725

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
 Frame = -3

Query: 312 KPDIAWNYGKSF--DDHKKSQCNYCKKIMRYGGVRRLKIHLSGSGSVAESCKLVPVEVRH 139
           K DIAW + K     D +K QC YC K+M+ GG+ RLK+HL+G     E+C   P EVR 
Sbjct: 28  KTDIAWGHAKIVLDSDKEKPQCIYCNKVMKGGGINRLKLHLAGETGQVEACSQAPEEVRF 87

Query: 138 LMRK 127
            M++
Sbjct: 88  KMKQ 91


>ref|XP_003605010.1| hypothetical protein MTR_4g022820 [Medicago truncatula]
           gi|355506065|gb|AES87207.1| hypothetical protein
           MTR_4g022820 [Medicago truncatula]
          Length = 965

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
 Frame = -3

Query: 312 KPDIAWNYGKSF--DDHKKSQCNYCKKIMRYGGVRRLKIHLSGSGSVAESCKLVPVEVRH 139
           K DIAW + K     D +K QC YC K+M+ GG+ RLK+HL+G     E+C   P EVR 
Sbjct: 266 KTDIAWGHAKIVLHGDKEKPQCIYCNKVMKGGGINRLKLHLAGETGQVEACSQAPEEVRF 325

Query: 138 LMRK 127
            M++
Sbjct: 326 KMKQ 329


>ref|XP_002521049.1| DNA binding protein, putative [Ricinus communis]
           gi|223539752|gb|EEF41333.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 854

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
 Frame = -3

Query: 324 IMSHKPDIAWNYGK--SFDDHKKSQCNYCKKIMRYGGVRRLKIHLSGSGSVAESCKLVPV 151
           +  HK D+AW Y +   + D  + +CNYC K+ + GG+ R K HL+G    A  C  VP 
Sbjct: 122 VTRHKKDMAWKYCQPSKYGDRVQIKCNYCGKVFKGGGIHRFKEHLAGRKGAAPICDRVPS 181

Query: 150 EVRHLMRKLLKD 115
           +VR LM++ L +
Sbjct: 182 DVRLLMQQCLHE 193


>ref|XP_003530634.1| PREDICTED: uncharacterized protein LOC100794155 [Glycine max]
          Length = 800

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
 Frame = -3

Query: 312 KPDIAWNYGKSFDDHKKS--QCNYCKKIMRYGGVRRLKIHLSGSGSVAESCKLVPVEVRH 139
           K D AW + K  ++++K+   C YC KI R GG+ R K HL+G     E CK VP +VR 
Sbjct: 54  KSDPAWGHCKVAEENEKTILLCLYCNKIFRGGGINRFKNHLAGEKGQCEQCKNVPADVRF 113

Query: 138 LMRKLLKD 115
            M++ L +
Sbjct: 114 QMKQNLDE 121


>ref|XP_002329731.1| predicted protein [Populus trichocarpa] gi|222870639|gb|EEF07770.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = -3

Query: 306 DIAWNYGKSFDDHKKSQ-CNYCKKIMRYGGVRRLKIHLSGSGSVAESCKLVPVEVRHLMR 130
           D AW +G+     K S  C +C K++  GG+ RLK HL+G     E+CK VP++V+  M+
Sbjct: 21  DPAWAHGQVVVGTKNSSICVHCSKMINGGGITRLKHHLAGIKGQVEACKKVPLDVKWQMK 80

Query: 129 KLLKDFMDQSHWKFLEKDNRER 64
           +L++D         +EK+ R+R
Sbjct: 81  QLIEDLT-------MEKEKRKR 95


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