BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026760
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   357   2e-96
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              357   2e-96
gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth...   356   4e-96
ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   340   2e-91
ref|XP_003570680.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   340   3e-91

>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  357 bits (916), Expect = 2e-96
 Identities = 176/217 (81%), Positives = 195/217 (89%)
 Frame = +3

Query: 3    KIERLKARSTRLLGRIQQIEPSGWKEFLQISQVIHEARALDINTHMIFPLGETAAAIRGE 182
            KI+RLKARS RL  RI+QIEPSGWKEFLQ+S VIHE RALDINTH+IFPLGETAAAIRGE
Sbjct: 958  KIKRLKARSNRLSSRIEQIEPSGWKEFLQVSNVIHETRALDINTHIIFPLGETAAAIRGE 1017

Query: 183  NELWLAIVLRNKILLDLKPAQLAGVCGSLVSEGIKIRPSKNDSYIYEPSTAVVNIVEALD 362
            NELWLA+VLR+K+LL LKPAQLA VCGSLVSEGIK+RP KN+SYIYE ST V+N++  LD
Sbjct: 1018 NELWLAMVLRSKVLLGLKPAQLAAVCGSLVSEGIKVRPWKNNSYIYEASTTVINVISLLD 1077

Query: 363  DQRSSFMLLQEKHGVKISCGLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTI 542
            +QR+S + LQEKH V+I C LDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTI
Sbjct: 1078 EQRNSLLQLQEKHDVQIPCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTI 1137

Query: 543  DLLCQIPKLPDIHPVLQKTAVMASNVMDRPPISELAG 653
            D+L QIPKLPDI P+LQ  A+ ASNVMDRPPISELAG
Sbjct: 1138 DILAQIPKLPDIDPLLQSNAMTASNVMDRPPISELAG 1174


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  357 bits (916), Expect = 2e-96
 Identities = 176/217 (81%), Positives = 195/217 (89%)
 Frame = +3

Query: 3    KIERLKARSTRLLGRIQQIEPSGWKEFLQISQVIHEARALDINTHMIFPLGETAAAIRGE 182
            KI+RLKARS RL  RI+QIEPSGWKEFLQ+S VIHE RALDINTH+IFPLGETAAAIRGE
Sbjct: 848  KIKRLKARSNRLSSRIEQIEPSGWKEFLQVSNVIHETRALDINTHIIFPLGETAAAIRGE 907

Query: 183  NELWLAIVLRNKILLDLKPAQLAGVCGSLVSEGIKIRPSKNDSYIYEPSTAVVNIVEALD 362
            NELWLA+VLR+K+LL LKPAQLA VCGSLVSEGIK+RP KN+SYIYE ST V+N++  LD
Sbjct: 908  NELWLAMVLRSKVLLGLKPAQLAAVCGSLVSEGIKVRPWKNNSYIYEASTTVINVISLLD 967

Query: 363  DQRSSFMLLQEKHGVKISCGLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTI 542
            +QR+S + LQEKH V+I C LDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTI
Sbjct: 968  EQRNSLLQLQEKHDVQIPCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTI 1027

Query: 543  DLLCQIPKLPDIHPVLQKTAVMASNVMDRPPISELAG 653
            D+L QIPKLPDI P+LQ  A+ ASNVMDRPPISELAG
Sbjct: 1028 DILAQIPKLPDIDPLLQSNAMTASNVMDRPPISELAG 1064


>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
          Length = 1159

 Score =  356 bits (913), Expect = 4e-96
 Identities = 173/217 (79%), Positives = 198/217 (91%)
 Frame = +3

Query: 3    KIERLKARSTRLLGRIQQIEPSGWKEFLQISQVIHEARALDINTHMIFPLGETAAAIRGE 182
            KI RLK RS RL+GRI+QIEP+GWKEFLQ+S VIHE+RALDINTH+IFPLGETAAAIRGE
Sbjct: 943  KIRRLKVRSKRLIGRIEQIEPTGWKEFLQVSNVIHESRALDINTHVIFPLGETAAAIRGE 1002

Query: 183  NELWLAIVLRNKILLDLKPAQLAGVCGSLVSEGIKIRPSKNDSYIYEPSTAVVNIVEALD 362
            NELWLA+VLRNK+LLDLKPAQLA VCGSLVSEGI++RP KN+S++YEPST V+N+++ L+
Sbjct: 1003 NELWLAMVLRNKLLLDLKPAQLAAVCGSLVSEGIRLRPWKNNSFVYEPSTTVLNVIDLLE 1062

Query: 363  DQRSSFMLLQEKHGVKISCGLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTI 542
            + +SS + LQEKHGV+I C LDSQFSGMVEAWASGLTW+EIMMDCAMDEGDLARLLRRTI
Sbjct: 1063 ETKSSILELQEKHGVQIPCCLDSQFSGMVEAWASGLTWKEIMMDCAMDEGDLARLLRRTI 1122

Query: 543  DLLCQIPKLPDIHPVLQKTAVMASNVMDRPPISELAG 653
            DLL QIPKLPDI P+LQ  A  AS+VMDRPPISELAG
Sbjct: 1123 DLLAQIPKLPDIDPLLQSNAKGASSVMDRPPISELAG 1159


>ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Glycine max]
          Length = 1162

 Score =  340 bits (872), Expect = 2e-91
 Identities = 167/217 (76%), Positives = 188/217 (86%)
 Frame = +3

Query: 3    KIERLKARSTRLLGRIQQIEPSGWKEFLQISQVIHEARALDINTHMIFPLGETAAAIRGE 182
            KI+RLK RS RL+ RI+QIEPSGWKEF+Q+S VIHE RALDINTH+IFPLGETAAAIRGE
Sbjct: 946  KIKRLKNRSKRLINRIEQIEPSGWKEFMQVSNVIHEIRALDINTHIIFPLGETAAAIRGE 1005

Query: 183  NELWLAIVLRNKILLDLKPAQLAGVCGSLVSEGIKIRPSKNDSYIYEPSTAVVNIVEALD 362
            NELWLA+VLRNKILL+LKPAQLA VC SLVS GIK+RP KN+SYIYEPS  V   +  LD
Sbjct: 1006 NELWLAMVLRNKILLELKPAQLAAVCASLVSAGIKVRPGKNNSYIYEPSATVTKFITLLD 1065

Query: 363  DQRSSFMLLQEKHGVKISCGLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTI 542
            +QRS+ + +Q+KH V ISC LDSQF GMVEAWASGLTWRE+MMDCAMD+GDLARLLRRTI
Sbjct: 1066 EQRSALLAMQDKHEVTISCCLDSQFCGMVEAWASGLTWRELMMDCAMDDGDLARLLRRTI 1125

Query: 543  DLLCQIPKLPDIHPVLQKTAVMASNVMDRPPISELAG 653
            DLL QIPKLPDI P+L+  A  AS+VMDRPPISEL G
Sbjct: 1126 DLLVQIPKLPDIDPLLKHNAKAASSVMDRPPISELVG 1162


>ref|XP_003570680.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Brachypodium distachyon]
          Length = 1168

 Score =  340 bits (871), Expect = 3e-91
 Identities = 168/217 (77%), Positives = 191/217 (88%)
 Frame = +3

Query: 3    KIERLKARSTRLLGRIQQIEPSGWKEFLQISQVIHEARALDINTHMIFPLGETAAAIRGE 182
            KIERL+ARS RL  RI QIEP+GWKEFLQIS+VI EAR LDINT +I+PLGETAAAIRGE
Sbjct: 952  KIERLEARSRRLTRRIMQIEPTGWKEFLQISKVIQEARVLDINTQVIYPLGETAAAIRGE 1011

Query: 183  NELWLAIVLRNKILLDLKPAQLAGVCGSLVSEGIKIRPSKNDSYIYEPSTAVVNIVEALD 362
            NELWLA+VLRNK+LLDLKP+QLA VCGSLVSEGIK+RP KN SY+YEPS+ V  ++  LD
Sbjct: 1012 NELWLAMVLRNKVLLDLKPSQLAAVCGSLVSEGIKLRPWKNSSYVYEPSSVVTGVINYLD 1071

Query: 363  DQRSSFMLLQEKHGVKISCGLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTI 542
            +QR+S + LQEKHGVKI C +D+QF+GMVEAWASGLTWREIMMD AMD+GDLARLLRRT+
Sbjct: 1072 EQRNSLIELQEKHGVKIPCEIDTQFAGMVEAWASGLTWREIMMDSAMDDGDLARLLRRTM 1131

Query: 543  DLLCQIPKLPDIHPVLQKTAVMASNVMDRPPISELAG 653
            DLL QIPKLPDI PVLQK A +A NVMDR P+SELAG
Sbjct: 1132 DLLAQIPKLPDIDPVLQKNAQIACNVMDRVPLSELAG 1168