BLASTX nr result

ID: Coptis21_contig00026706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026706
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33507.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002302950.1| predicted protein [Populus trichocarpa] gi|1...    60   1e-07

>emb|CBI33507.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
 Frame = -3

Query: 271 SLSTSNLTGSPMGTNSTNITESCRVINSFPKSLQYTRSHAIAQKIELRRPSYDHLLTAKL 92
           +L+ S  + SP+ T+ T+I++S   I+SF KS+++   H+  Q +ELRR S  HLLTA+ 
Sbjct: 2   ALTASKFSSSPVATDRTSISKSQGTISSFSKSIKHCGLHSKNQGVELRRQSSGHLLTARY 61

Query: 91  NFSSEGSRWISGKP----STRENSFLCHSTGT 8
            FS++G   I GK     S+R +S LC  TGT
Sbjct: 62  RFSNKGFWHICGKTGHYFSSRGSSVLCWLTGT 93


>ref|XP_002302950.1| predicted protein [Populus trichocarpa] gi|118488010|gb|ABK95826.1|
           unknown [Populus trichocarpa]
           gi|222844676|gb|EEE82223.1| predicted protein [Populus
           trichocarpa]
          Length = 460

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
 Frame = -3

Query: 271 SLSTSNLTGSPMGTNSTNITESCRVINSFPKSLQYTRSHAIAQKIELRRPSYDHLLTAKL 92
           +L+ S ++ SP  T     + S  +I SF KS Q  + H   Q IEL++ S  HLLTAKL
Sbjct: 2   ALNASKVSSSPFVTQRKLTSTSHGIICSFSKSFQKNKLHPTHQGIELQQLSSKHLLTAKL 61

Query: 91  NFSSEGSRWISGKP----STRENSFLCHSTGT 8
            FS E  + I GKP     +R +S LC ST T
Sbjct: 62  AFSGESLQGIHGKPVSLIISRRSSTLCQSTRT 93


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