BLASTX nr result

ID: Coptis21_contig00026685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026685
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34706.3| unnamed protein product [Vitis vinifera]              108   3e-22
ref|XP_002881229.1| hypothetical protein ARALYDRAFT_320989 [Arab...   107   1e-21
ref|XP_003525407.1| PREDICTED: uncharacterized protein LOC100801...   105   3e-21
ref|NP_180809.2| Stress responsive alpha-beta barrel domain prot...   103   1e-20
gb|AAN85202.1| hypothetical protein [Arabidopsis thaliana]            103   1e-20

>emb|CBI34706.3| unnamed protein product [Vitis vinifera]
          Length = 298

 Score =  108 bits (271), Expect = 3e-22
 Identities = 60/119 (50%), Positives = 71/119 (59%), Gaps = 11/119 (9%)
 Frame = -2

Query: 325 NWLPRRNRIKVHFSNG-----------WSSDSTEVIRKRNVVEHICXXXXXXXXXXXXXK 179
           N L     + V FSNG             + S +   KR VVEHIC             K
Sbjct: 38  NVLRLNGGVNVQFSNGKKRGAIFSASVGQNSSNDTEGKRKVVEHICLLKAKENLSEEEEK 97

Query: 178 DMLDYLYTLQYQMGGIVAISVGCLSGRNPDGYTHALYMRFQRKEDLAKFYKNSFYLGVL 2
           DMLDYLYT QYQM GI+AI++G +S +N + YTHA+YMRFQRKEDL KFY+N FYLGVL
Sbjct: 98  DMLDYLYTTQYQMRGIIAITLGRISDQNIENYTHAVYMRFQRKEDLGKFYENPFYLGVL 156


>ref|XP_002881229.1| hypothetical protein ARALYDRAFT_320989 [Arabidopsis lyrata subsp.
           lyrata] gi|297327068|gb|EFH57488.1| hypothetical protein
           ARALYDRAFT_320989 [Arabidopsis lyrata subsp. lyrata]
          Length = 276

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/88 (60%), Positives = 63/88 (71%)
 Frame = -2

Query: 265 STEVIRKRNVVEHICXXXXXXXXXXXXXKDMLDYLYTLQYQMGGIVAISVGCLSGRNPDG 86
           S++  + R VVEH+C             KDMLDYLYT QYQM GIVAISVGC+  RN + 
Sbjct: 47  SSKSNKTRKVVEHVCLLKAKEGLSEEVEKDMLDYLYTTQYQMRGIVAISVGCIGDRNIED 106

Query: 85  YTHALYMRFQRKEDLAKFYKNSFYLGVL 2
           YTHAL+MRFQRKEDL KFY+N+F+L VL
Sbjct: 107 YTHALFMRFQRKEDLGKFYENTFFLKVL 134


>ref|XP_003525407.1| PREDICTED: uncharacterized protein LOC100801905 [Glycine max]
          Length = 289

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/83 (60%), Positives = 59/83 (71%)
 Frame = -2

Query: 250 RKRNVVEHICXXXXXXXXXXXXXKDMLDYLYTLQYQMGGIVAISVGCLSGRNPDGYTHAL 71
           RKR +VEH+C              DMLDYLYT QYQMGG+VAIS+G +S  NP+ YTHAL
Sbjct: 65  RKRKIVEHVCLLKAKQDLSEDEENDMLDYLYTTQYQMGGVVAISLGRISAPNPERYTHAL 124

Query: 70  YMRFQRKEDLAKFYKNSFYLGVL 2
           +MRFQ+KE+L KFY N FYL VL
Sbjct: 125 FMRFQKKENLEKFYDNPFYLKVL 147


>ref|NP_180809.2| Stress responsive alpha-beta barrel domain protein [Arabidopsis
           thaliana] gi|51971963|dbj|BAD44646.1| unknown protein
           [Arabidopsis thaliana] gi|87116636|gb|ABD19682.1|
           At2g32500 [Arabidopsis thaliana]
           gi|330253600|gb|AEC08694.1| Stress responsive alpha-beta
           barrel domain protein [Arabidopsis thaliana]
          Length = 276

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/88 (59%), Positives = 62/88 (70%)
 Frame = -2

Query: 265 STEVIRKRNVVEHICXXXXXXXXXXXXXKDMLDYLYTLQYQMGGIVAISVGCLSGRNPDG 86
           S++  + R VVEH+C             KDMLDYLYT QYQM GIVAISVGC+  RN + 
Sbjct: 47  SSKSNKTRKVVEHVCLLKAKEGLSEEVEKDMLDYLYTTQYQMRGIVAISVGCIGDRNNEY 106

Query: 85  YTHALYMRFQRKEDLAKFYKNSFYLGVL 2
           +THALYMRFQ+KEDL KFY+N F+L VL
Sbjct: 107 FTHALYMRFQKKEDLDKFYENPFFLKVL 134


>gb|AAN85202.1| hypothetical protein [Arabidopsis thaliana]
          Length = 272

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/88 (59%), Positives = 62/88 (70%)
 Frame = -2

Query: 265 STEVIRKRNVVEHICXXXXXXXXXXXXXKDMLDYLYTLQYQMGGIVAISVGCLSGRNPDG 86
           S++  + R VVEH+C             KDMLDYLYT QYQM GIVAISVGC+  RN + 
Sbjct: 43  SSKSNKTRKVVEHVCLLKAKEGLSEEVEKDMLDYLYTTQYQMRGIVAISVGCIGDRNNEY 102

Query: 85  YTHALYMRFQRKEDLAKFYKNSFYLGVL 2
           +THALYMRFQ+KEDL KFY+N F+L VL
Sbjct: 103 FTHALYMRFQKKEDLDKFYENPFFLKVL 130


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