BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026648
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268532.1| PREDICTED: 30S ribosomal protein S31, mitoch...    65   6e-09
emb|CAN75923.1| hypothetical protein VITISV_029514 [Vitis vinifera]    65   6e-09
ref|XP_002513001.1| 30S ribosomal protein S31, mitochondrial pre...    64   1e-08
ref|XP_002313008.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002878542.1| hypothetical protein ARALYDRAFT_480991 [Arab...    59   3e-07

>ref|XP_002268532.1| PREDICTED: 30S ribosomal protein S31, mitochondrial [Vitis
           vinifera]
          Length = 88

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/84 (46%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
 Frame = -2

Query: 362 QWCGAIARRV--AMTERAAVSSS-------PVLCXXXXXXXXXXXXXXGSYGNAXXXXXX 210
           QWCGA ARR+   MTER+ V+SS       P+LC              GSYGNA      
Sbjct: 5   QWCGAAARRMMTTMTERSTVASSSSAAMGVPILCGRGDKKTKKGKRFKGSYGNARPKKEK 64

Query: 209 XXXXXKDRVECPRDTPWPLPFKLI 138
                KD+VE PR  PWPLPFKLI
Sbjct: 65  KIERIKDKVEVPRSIPWPLPFKLI 88


>emb|CAN75923.1| hypothetical protein VITISV_029514 [Vitis vinifera]
          Length = 88

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/84 (46%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
 Frame = -2

Query: 362 QWCGAIARRV--AMTERAAVSSS-------PVLCXXXXXXXXXXXXXXGSYGNAXXXXXX 210
           QWCGA ARR+   MTER+ V+SS       P+LC              GSYGNA      
Sbjct: 5   QWCGAAARRMMTTMTERSTVASSSSAAMGVPILCGRGDKKTKKGKRFKGSYGNARPKKEK 64

Query: 209 XXXXXKDRVECPRDTPWPLPFKLI 138
                KD+VE PR  PWPLPFKLI
Sbjct: 65  KIERIKDKVEVPRSXPWPLPFKLI 88


>ref|XP_002513001.1| 30S ribosomal protein S31, mitochondrial precursor, putative
           [Ricinus communis] gi|223548012|gb|EEF49504.1| 30S
           ribosomal protein S31, mitochondrial precursor, putative
           [Ricinus communis]
          Length = 87

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/82 (42%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
 Frame = -2

Query: 362 QWCGAIARRVAMTERAA-------VSSSPVLCXXXXXXXXXXXXXXGSYGNAXXXXXXXX 204
           QWCGA+ARRV  T+ +A          +PV+C              GSYGN+        
Sbjct: 6   QWCGAVARRVVATQSSARIGGAVAAEEAPVVCGRGDKRTKKGKRFKGSYGNSRPKKEKMI 65

Query: 203 XXXKDRVECPRDTPWPLPFKLI 138
              KD+VE PR TPWPLPFKLI
Sbjct: 66  ERIKDKVEVPRSTPWPLPFKLI 87


>ref|XP_002313008.1| predicted protein [Populus trichocarpa] gi|222849416|gb|EEE86963.1|
           predicted protein [Populus trichocarpa]
          Length = 90

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/85 (42%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
 Frame = -2

Query: 362 QWCGAIARRVAMTERAAVSSS----------PVLCXXXXXXXXXXXXXXGSYGNAXXXXX 213
           QWCGA+ARR    +R+AV S+          P+LC              G+YGNA     
Sbjct: 6   QWCGAVARRAMAGQRSAVFSTSSISSGAEMAPILCGRGDKKTKRGKRFKGTYGNARPKKE 65

Query: 212 XXXXXXKDRVECPRDTPWPLPFKLI 138
                 KD+VE PR TPWPLPFKLI
Sbjct: 66  KKIERIKDKVEVPRSTPWPLPFKLI 90


>ref|XP_002878542.1| hypothetical protein ARALYDRAFT_480991 [Arabidopsis lyrata subsp.
           lyrata] gi|297324381|gb|EFH54801.1| hypothetical protein
           ARALYDRAFT_480991 [Arabidopsis lyrata subsp. lyrata]
          Length = 95

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/91 (40%), Positives = 42/91 (46%), Gaps = 16/91 (17%)
 Frame = -2

Query: 362 QWCGAIARRVAMTERAAVSS------SPV----------LCXXXXXXXXXXXXXXGSYGN 231
           QWCGAI RR+ MT+RA  S       SP           LC              GSYGN
Sbjct: 5   QWCGAITRRIMMTQRALTSPARYSSLSPASAAPAISEMDLCGRGDKKTKKGKRFKGSYGN 64

Query: 230 AXXXXXXXXXXXKDRVECPRDTPWPLPFKLI 138
           +           KD++E PR TPWPLPFKLI
Sbjct: 65  SRGKKQKMIERIKDKLEVPRSTPWPLPFKLI 95